Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.06■□□□□ 0.32
CSPG4P5Q96PW8 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 REXO1L8P-201ENST00000604378 1897 ntBASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 AC016027.1-202ENST00000607927 1699 ntBASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 MIR574-201ENST00000385209 96 ntBASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 MIR940-201ENST00000401276 94 ntBASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 AC006449.6-201ENST00000612330 2296 ntBASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG4P5Q96PW8 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 AC023274.1-201ENST00000418278 595 ntBASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 KRT18P58-201ENST00000527480 1120 ntBASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 AL078644.1-201ENST00000609881 752 ntBASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 AC005622.1-201ENST00000636801 1703 ntBASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 AL596087.1-201ENST00000400979 1969 ntBASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms