Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FGD4Q96M96 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.66■□□□□ 0.58
FGD4Q96M96 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.66■□□□□ 0.58
FGD4Q96M96 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.66■□□□□ 0.58
FGD4Q96M96 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.66■□□□□ 0.58
FGD4Q96M96 NME2P1-201ENST00000426182 414 ntBASIC18.66■□□□□ 0.58
FGD4Q96M96 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
FGD4Q96M96 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.66■□□□□ 0.58
FGD4Q96M96 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.66■□□□□ 0.58
FGD4Q96M96 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
FGD4Q96M96 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.66■□□□□ 0.58
FGD4Q96M96 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.66■□□□□ 0.58
FGD4Q96M96 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
FGD4Q96M96 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
FGD4Q96M96 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FGD4Q96M96 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FGD4Q96M96 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FGD4Q96M96 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FGD4Q96M96 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
FGD4Q96M96 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FGD4Q96M96 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
FGD4Q96M96 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FGD4Q96M96 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FGD4Q96M96 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FGD4Q96M96 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
FGD4Q96M96 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
FGD4Q96M96 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
FGD4Q96M96 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FGD4Q96M96 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FGD4Q96M96 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.65■□□□□ 0.58
FGD4Q96M96 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FGD4Q96M96 RN7SL692P-201ENST00000464677 288 ntBASIC18.65■□□□□ 0.58
FGD4Q96M96 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.65■□□□□ 0.58
FGD4Q96M96 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.65■□□□□ 0.58
FGD4Q96M96 AL512361.1-201ENST00000554200 418 ntBASIC18.65■□□□□ 0.58
FGD4Q96M96 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.65■□□□□ 0.58
FGD4Q96M96 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.65■□□□□ 0.58
FGD4Q96M96 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.65■□□□□ 0.58
FGD4Q96M96 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.65■□□□□ 0.58
FGD4Q96M96 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.65■□□□□ 0.58
FGD4Q96M96 AC004233.3-201ENST00000607794 1269 ntBASIC18.65■□□□□ 0.58
FGD4Q96M96 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FGD4Q96M96 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FGD4Q96M96 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.65■□□□□ 0.58
FGD4Q96M96 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.65■□□□□ 0.58
FGD4Q96M96 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FGD4Q96M96 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.65■□□□□ 0.58
FGD4Q96M96 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FGD4Q96M96 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
FGD4Q96M96 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FGD4Q96M96 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
FGD4Q96M96 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FGD4Q96M96 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.64■□□□□ 0.58
FGD4Q96M96 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
FGD4Q96M96 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
FGD4Q96M96 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
FGD4Q96M96 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.64■□□□□ 0.58
FGD4Q96M96 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
FGD4Q96M96 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.64■□□□□ 0.58
FGD4Q96M96 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FGD4Q96M96 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FGD4Q96M96 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.64■□□□□ 0.57
FGD4Q96M96 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
FGD4Q96M96 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
FGD4Q96M96 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
FGD4Q96M96 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FGD4Q96M96 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.64■□□□□ 0.57
FGD4Q96M96 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FGD4Q96M96 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.64■□□□□ 0.57
FGD4Q96M96 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.64■□□□□ 0.57
FGD4Q96M96 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.64■□□□□ 0.57
FGD4Q96M96 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.64■□□□□ 0.57
FGD4Q96M96 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.64■□□□□ 0.57
FGD4Q96M96 API5-211ENST00000534695 560 ntTSL 5 BASIC18.64■□□□□ 0.57
FGD4Q96M96 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
FGD4Q96M96 CR383656.12-201ENST00000549567 513 ntBASIC18.64■□□□□ 0.57
FGD4Q96M96 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.64■□□□□ 0.57
FGD4Q96M96 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FGD4Q96M96 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
FGD4Q96M96 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FGD4Q96M96 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
FGD4Q96M96 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FGD4Q96M96 AC060834.1-201ENST00000443027 2032 ntBASIC18.64■□□□□ 0.57
FGD4Q96M96 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FGD4Q96M96 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.64■□□□□ 0.57
FGD4Q96M96 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.64■□□□□ 0.57
FGD4Q96M96 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.64■□□□□ 0.57
FGD4Q96M96 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.64■□□□□ 0.57
FGD4Q96M96 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.63■□□□□ 0.57
FGD4Q96M96 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
FGD4Q96M96 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FGD4Q96M96 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.63■□□□□ 0.57
FGD4Q96M96 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
FGD4Q96M96 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FGD4Q96M96 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FGD4Q96M96 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
FGD4Q96M96 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FGD4Q96M96 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FGD4Q96M96 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FGD4Q96M96 GK-202ENST00000378941 458 ntTSL 3 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms