Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.62■□□□□ 0.57
USP6NLQ92738 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.62■□□□□ 0.57
USP6NLQ92738 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.62■□□□□ 0.57
USP6NLQ92738 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.62■□□□□ 0.57
USP6NLQ92738 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP6NLQ92738 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP6NLQ92738 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP6NLQ92738 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP6NLQ92738 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6NLQ92738 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6NLQ92738 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.61■□□□□ 0.57
USP6NLQ92738 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
USP6NLQ92738 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
USP6NLQ92738 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6NLQ92738 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
USP6NLQ92738 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP6NLQ92738 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6NLQ92738 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP6NLQ92738 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
USP6NLQ92738 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.61■□□□□ 0.57
USP6NLQ92738 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.61■□□□□ 0.57
USP6NLQ92738 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6NLQ92738 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6NLQ92738 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6NLQ92738 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP6NLQ92738 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
USP6NLQ92738 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
USP6NLQ92738 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6NLQ92738 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.61■□□□□ 0.57
USP6NLQ92738 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.61■□□□□ 0.57
USP6NLQ92738 AL589987.1-201ENST00000453380 819 ntBASIC18.61■□□□□ 0.57
USP6NLQ92738 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP6NLQ92738 AC119751.2-201ENST00000504529 210 ntBASIC18.61■□□□□ 0.57
USP6NLQ92738 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.61■□□□□ 0.57
USP6NLQ92738 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.61■□□□□ 0.57
USP6NLQ92738 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.61■□□□□ 0.57
USP6NLQ92738 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
USP6NLQ92738 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
USP6NLQ92738 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
USP6NLQ92738 AC023310.3-201ENST00000557027 670 ntBASIC18.61■□□□□ 0.57
USP6NLQ92738 AC100756.1-201ENST00000562736 682 ntBASIC18.61■□□□□ 0.57
USP6NLQ92738 AC138749.3-201ENST00000567691 622 ntBASIC18.61■□□□□ 0.57
USP6NLQ92738 MIR4259-201ENST00000584466 101 ntBASIC18.61■□□□□ 0.57
USP6NLQ92738 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.61■□□□□ 0.57
USP6NLQ92738 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.61■□□□□ 0.57
USP6NLQ92738 AC116165.1-201ENST00000611806 668 ntBASIC18.61■□□□□ 0.57
USP6NLQ92738 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.61■□□□□ 0.57
USP6NLQ92738 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6NLQ92738 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
USP6NLQ92738 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6NLQ92738 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6NLQ92738 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP6NLQ92738 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6NLQ92738 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6NLQ92738 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
USP6NLQ92738 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.6■□□□□ 0.57
USP6NLQ92738 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
USP6NLQ92738 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.6■□□□□ 0.57
USP6NLQ92738 AL589702.1-201ENST00000641229 1509 ntBASIC18.6■□□□□ 0.57
USP6NLQ92738 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP6NLQ92738 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.6■□□□□ 0.57
USP6NLQ92738 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
USP6NLQ92738 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP6NLQ92738 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP6NLQ92738 AC012313.1-201ENST00000593393 3059 ntBASIC18.6■□□□□ 0.57
USP6NLQ92738 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP6NLQ92738 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP6NLQ92738 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP6NLQ92738 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP6NLQ92738 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
USP6NLQ92738 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
USP6NLQ92738 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.6■□□□□ 0.57
USP6NLQ92738 AC098850.1-201ENST00000419919 790 ntBASIC18.6■□□□□ 0.57
USP6NLQ92738 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
USP6NLQ92738 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.6■□□□□ 0.57
USP6NLQ92738 MYCLP2-201ENST00000449268 967 ntBASIC18.6■□□□□ 0.57
USP6NLQ92738 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.6■□□□□ 0.57
USP6NLQ92738 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
USP6NLQ92738 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
USP6NLQ92738 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.6■□□□□ 0.57
USP6NLQ92738 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.6■□□□□ 0.57
USP6NLQ92738 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.6■□□□□ 0.57
USP6NLQ92738 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP6NLQ92738 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
USP6NLQ92738 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.6■□□□□ 0.57
USP6NLQ92738 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP6NLQ92738 AL512343.1-201ENST00000605837 169 ntBASIC18.6■□□□□ 0.57
USP6NLQ92738 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP6NLQ92738 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP6NLQ92738 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP6NLQ92738 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP6NLQ92738 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.6■□□□□ 0.57
USP6NLQ92738 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP6NLQ92738 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
USP6NLQ92738 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP6NLQ92738 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP6NLQ92738 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP6NLQ92738 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USP6NLQ92738 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP6NLQ92738 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms