Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 BICD1-207ENST00000551848 1962 ntBASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 AC079316.1-201ENST00000548397 411 ntBASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 MIR33B-201ENST00000385104 96 ntBASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 AC025279.2-201ENST00000569730 653 ntBASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 AC092053.1-201ENST00000605787 1936 ntBASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 NME4-207ENST00000450036 985 ntTSL 3 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 AL607033.1-201ENST00000623900 1599 ntBASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 AC078819.1-201ENST00000547454 765 ntBASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 AC012085.1-201ENST00000548270 765 ntBASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 Z93015.1-201ENST00000451718 390 ntBASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 AL591846.1-201ENST00000451736 433 ntBASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 AL022328.3-201ENST00000607943 679 ntBASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ALMS1Q8TCU4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 CYP4F24P-201ENST00000586049 1580 ntBASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 YBX1P6-201ENST00000442962 1002 ntBASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms