Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCC2Q8TAQ2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCC2Q8TAQ2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCC2Q8TAQ2 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SMARCC2Q8TAQ2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCC2Q8TAQ2 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.38■□□□□ 0.69
SMARCC2Q8TAQ2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.38■□□□□ 0.69
SMARCC2Q8TAQ2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCC2Q8TAQ2 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCC2Q8TAQ2 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.38■□□□□ 0.69
SMARCC2Q8TAQ2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.38■□□□□ 0.69
SMARCC2Q8TAQ2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.38■□□□□ 0.69
SMARCC2Q8TAQ2 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.38■□□□□ 0.69
SMARCC2Q8TAQ2 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SMARCC2Q8TAQ2 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCC2Q8TAQ2 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCC2Q8TAQ2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCC2Q8TAQ2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCC2Q8TAQ2 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCC2Q8TAQ2 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 ALG1L5P-201ENST00000482043 771 ntBASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 AC005829.1-201ENST00000570002 483 ntBASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 AC068137.2-201ENST00000605408 478 ntBASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 AL078644.1-201ENST00000609881 752 ntBASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 AC055717.3-201ENST00000622967 595 ntBASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 C20orf181-201ENST00000623918 480 ntBASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 LINC02199-201ENST00000506655 2702 ntBASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 LINC01144-201ENST00000626198 1710 ntBASIC19.37■□□□□ 0.69
SMARCC2Q8TAQ2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 AC012569.1-201ENST00000591191 1524 ntBASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 MIR4515-201ENST00000584082 81 ntBASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 AL645728.2-201ENST00000641974 660 ntBASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SMARCC2Q8TAQ2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms