Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 AC025580.3-201ENST00000617932 1424 ntBASIC17.05■□□□□ 0.32
PAF1Q8N7H5 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 FAM185BP-201ENST00000443595 716 ntBASIC17.05■□□□□ 0.32
PAF1Q8N7H5 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 AL353732.1-201ENST00000569618 1459 ntBASIC17.05■□□□□ 0.32
PAF1Q8N7H5 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PAF1Q8N7H5 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 OR2I1P-209ENST00000641730 5365 ntBASIC17.04■□□□□ 0.32
PAF1Q8N7H5 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 AL121761.2-201ENST00000598007 1648 ntBASIC17.04■□□□□ 0.32
PAF1Q8N7H5 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 BX842568.4-201ENST00000421222 227 ntBASIC17.04■□□□□ 0.32
PAF1Q8N7H5 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 AP002490.2-201ENST00000524791 560 ntBASIC17.04■□□□□ 0.32
PAF1Q8N7H5 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 MIR3687-2-201ENST00000577708 61 ntBASIC17.04■□□□□ 0.32
PAF1Q8N7H5 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 MIR3687-1-201ENST00000614492 61 ntBASIC17.04■□□□□ 0.32
PAF1Q8N7H5 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 AC012569.1-201ENST00000591191 1524 ntBASIC17.04■□□□□ 0.32
PAF1Q8N7H5 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms