Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
XRN1Q8IZH2 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC22.53■■□□□ 1.2
XRN1Q8IZH2 GOLGA2P4-201ENST00000441462 777 ntBASIC22.53■■□□□ 1.2
XRN1Q8IZH2 TARDBPP1-201ENST00000442013 1203 ntBASIC22.53■■□□□ 1.2
XRN1Q8IZH2 NME4-207ENST00000450036 985 ntTSL 3 BASIC22.53■■□□□ 1.2
XRN1Q8IZH2 AC007551.1-201ENST00000457394 519 ntBASIC22.53■■□□□ 1.2
XRN1Q8IZH2 FAM86HP-204ENST00000513466 959 ntBASIC22.53■■□□□ 1.2
XRN1Q8IZH2 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
XRN1Q8IZH2 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC22.53■■□□□ 1.2
XRN1Q8IZH2 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
XRN1Q8IZH2 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
XRN1Q8IZH2 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
XRN1Q8IZH2 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
XRN1Q8IZH2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC22.53■■□□□ 1.2
XRN1Q8IZH2 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
XRN1Q8IZH2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
XRN1Q8IZH2 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
XRN1Q8IZH2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
XRN1Q8IZH2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC22.52■■□□□ 1.2
XRN1Q8IZH2 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC22.52■■□□□ 1.2
XRN1Q8IZH2 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC22.52■■□□□ 1.2
XRN1Q8IZH2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
XRN1Q8IZH2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
XRN1Q8IZH2 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC22.52■■□□□ 1.2
XRN1Q8IZH2 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC22.52■■□□□ 1.2
XRN1Q8IZH2 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC22.52■■□□□ 1.2
XRN1Q8IZH2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
XRN1Q8IZH2 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
XRN1Q8IZH2 TPO-206ENST00000382269 1155 ntTSL 5 BASIC22.52■■□□□ 1.2
XRN1Q8IZH2 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC22.52■■□□□ 1.2
XRN1Q8IZH2 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC22.52■■□□□ 1.2
XRN1Q8IZH2 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
XRN1Q8IZH2 PTP4A1P2-201ENST00000546033 454 ntBASIC22.52■■□□□ 1.2
XRN1Q8IZH2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC22.52■■□□□ 1.2
XRN1Q8IZH2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
XRN1Q8IZH2 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
XRN1Q8IZH2 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
XRN1Q8IZH2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
XRN1Q8IZH2 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC22.52■■□□□ 1.2
XRN1Q8IZH2 GGT3P-204ENST00000453783 1664 ntBASIC22.52■■□□□ 1.2
XRN1Q8IZH2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
XRN1Q8IZH2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
XRN1Q8IZH2 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
XRN1Q8IZH2 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC22.51■■□□□ 1.19
XRN1Q8IZH2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
XRN1Q8IZH2 AC012441.1-201ENST00000446669 685 ntBASIC22.51■■□□□ 1.19
XRN1Q8IZH2 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC22.51■■□□□ 1.19
XRN1Q8IZH2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC22.51■■□□□ 1.19
XRN1Q8IZH2 MSTO2P-201ENST00000314835 1709 ntBASIC22.51■■□□□ 1.19
XRN1Q8IZH2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.51■■□□□ 1.19
XRN1Q8IZH2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC22.51■■□□□ 1.19
XRN1Q8IZH2 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
XRN1Q8IZH2 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC22.51■■□□□ 1.19
XRN1Q8IZH2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
XRN1Q8IZH2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
XRN1Q8IZH2 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
XRN1Q8IZH2 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
XRN1Q8IZH2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
XRN1Q8IZH2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
XRN1Q8IZH2 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
XRN1Q8IZH2 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
XRN1Q8IZH2 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
XRN1Q8IZH2 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
XRN1Q8IZH2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
XRN1Q8IZH2 AL355864.2-201ENST00000447420 863 ntBASIC22.51■■□□□ 1.19
XRN1Q8IZH2 BCRP2-202ENST00000447763 634 ntBASIC22.51■■□□□ 1.19
XRN1Q8IZH2 FXR1-221ENST00000491674 365 ntTSL 2 BASIC22.51■■□□□ 1.19
XRN1Q8IZH2 BCRP6-201ENST00000510112 632 ntBASIC22.51■■□□□ 1.19
XRN1Q8IZH2 BCRP7-201ENST00000511549 544 ntBASIC22.51■■□□□ 1.19
XRN1Q8IZH2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC22.51■■□□□ 1.19
XRN1Q8IZH2 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
XRN1Q8IZH2 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
XRN1Q8IZH2 AC005252.2-201ENST00000624630 1141 ntBASIC22.51■■□□□ 1.19
XRN1Q8IZH2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
XRN1Q8IZH2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
XRN1Q8IZH2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
XRN1Q8IZH2 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
XRN1Q8IZH2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC22.5■■□□□ 1.19
XRN1Q8IZH2 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
XRN1Q8IZH2 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
XRN1Q8IZH2 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC22.5■■□□□ 1.19
XRN1Q8IZH2 MGST3-203ENST00000367885 680 ntTSL 2 BASIC22.5■■□□□ 1.19
XRN1Q8IZH2 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC22.5■■□□□ 1.19
XRN1Q8IZH2 OLR1-203ENST00000432556 950 ntTSL 2 BASIC22.5■■□□□ 1.19
XRN1Q8IZH2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
XRN1Q8IZH2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
XRN1Q8IZH2 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
XRN1Q8IZH2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC22.5■■□□□ 1.19
XRN1Q8IZH2 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC22.5■■□□□ 1.19
XRN1Q8IZH2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC22.5■■□□□ 1.19
XRN1Q8IZH2 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
XRN1Q8IZH2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
XRN1Q8IZH2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC22.49■■□□□ 1.19
XRN1Q8IZH2 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC22.49■■□□□ 1.19
XRN1Q8IZH2 TOMM22P5-201ENST00000416399 439 ntBASIC22.49■■□□□ 1.19
XRN1Q8IZH2 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC22.49■■□□□ 1.19
XRN1Q8IZH2 KRT18P64-201ENST00000434946 1219 ntBASIC22.49■■□□□ 1.19
XRN1Q8IZH2 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC22.49■■□□□ 1.19
XRN1Q8IZH2 PARP8-218ENST00000513738 596 ntTSL 4 BASIC22.49■■□□□ 1.19
XRN1Q8IZH2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms