Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 SPDYE19P-201ENST00000338590 713 ntBASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 AL080243.2-201ENST00000418783 582 ntBASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 RN7SL752P-201ENST00000463779 287 ntBASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 AP006294.1-201ENST00000415407 339 ntBASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 DFFBP1-201ENST00000433250 979 ntBASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 AC132938.2-201ENST00000579188 680 ntBASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 AL591163.1-201ENST00000641757 987 ntBASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEFF1Q8IYR6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEFF1Q8IYR6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TMEFF1Q8IYR6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TMEFF1Q8IYR6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TMEFF1Q8IYR6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.36■□□□□ 0.21
TMEFF1Q8IYR6 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEFF1Q8IYR6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TMEFF1Q8IYR6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEFF1Q8IYR6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TMEFF1Q8IYR6 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TMEFF1Q8IYR6 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TMEFF1Q8IYR6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEFF1Q8IYR6 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEFF1Q8IYR6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.36■□□□□ 0.21
TMEFF1Q8IYR6 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
TMEFF1Q8IYR6 AC087499.6-201ENST00000411576 835 ntBASIC16.36■□□□□ 0.21
TMEFF1Q8IYR6 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.36■□□□□ 0.21
TMEFF1Q8IYR6 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.36■□□□□ 0.21
TMEFF1Q8IYR6 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.36■□□□□ 0.21
TMEFF1Q8IYR6 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.36■□□□□ 0.21
TMEFF1Q8IYR6 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms