Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
UBR1Q8IWV7 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
UBR1Q8IWV7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
UBR1Q8IWV7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
UBR1Q8IWV7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
UBR1Q8IWV7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
UBR1Q8IWV7 AL391256.1-201ENST00000443260 1855 ntBASIC23.05■■□□□ 1.28
UBR1Q8IWV7 U82695.1-201ENST00000635752 1889 ntBASIC23.05■■□□□ 1.28
UBR1Q8IWV7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC23.05■■□□□ 1.28
UBR1Q8IWV7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
UBR1Q8IWV7 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC23.05■■□□□ 1.28
UBR1Q8IWV7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
UBR1Q8IWV7 AC007969.1-201ENST00000433675 447 ntBASIC23.05■■□□□ 1.28
UBR1Q8IWV7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC23.05■■□□□ 1.28
UBR1Q8IWV7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
UBR1Q8IWV7 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
UBR1Q8IWV7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
UBR1Q8IWV7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC23.05■■□□□ 1.28
UBR1Q8IWV7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC23.05■■□□□ 1.28
UBR1Q8IWV7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
UBR1Q8IWV7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC23.05■■□□□ 1.28
UBR1Q8IWV7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC23.05■■□□□ 1.28
UBR1Q8IWV7 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC23.05■■□□□ 1.28
UBR1Q8IWV7 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
UBR1Q8IWV7 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC23.05■■□□□ 1.28
UBR1Q8IWV7 ATF5-205ENST00000600336 682 ntTSL 2 BASIC23.05■■□□□ 1.28
UBR1Q8IWV7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC23.05■■□□□ 1.28
UBR1Q8IWV7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
UBR1Q8IWV7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
UBR1Q8IWV7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC23.04■■□□□ 1.28
UBR1Q8IWV7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
UBR1Q8IWV7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC23.04■■□□□ 1.28
UBR1Q8IWV7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
UBR1Q8IWV7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
UBR1Q8IWV7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC23.04■■□□□ 1.28
UBR1Q8IWV7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
UBR1Q8IWV7 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
UBR1Q8IWV7 BAATP1-201ENST00000412284 1225 ntBASIC23.04■■□□□ 1.28
UBR1Q8IWV7 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC23.04■■□□□ 1.28
UBR1Q8IWV7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC23.04■■□□□ 1.28
UBR1Q8IWV7 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC23.04■■□□□ 1.28
UBR1Q8IWV7 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC23.04■■□□□ 1.28
UBR1Q8IWV7 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
UBR1Q8IWV7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
UBR1Q8IWV7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
UBR1Q8IWV7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC23.04■■□□□ 1.28
UBR1Q8IWV7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC23.04■■□□□ 1.28
UBR1Q8IWV7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC23.04■■□□□ 1.28
UBR1Q8IWV7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
UBR1Q8IWV7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC23.03■■□□□ 1.28
UBR1Q8IWV7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
UBR1Q8IWV7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
UBR1Q8IWV7 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
UBR1Q8IWV7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC23.03■■□□□ 1.28
UBR1Q8IWV7 AC134915.1-201ENST00000426461 574 ntBASIC23.03■■□□□ 1.28
UBR1Q8IWV7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC23.03■■□□□ 1.28
UBR1Q8IWV7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC23.03■■□□□ 1.28
UBR1Q8IWV7 PARP8-206ENST00000503665 572 ntTSL 4 BASIC23.03■■□□□ 1.28
UBR1Q8IWV7 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC23.03■■□□□ 1.28
UBR1Q8IWV7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC23.03■■□□□ 1.28
UBR1Q8IWV7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC23.03■■□□□ 1.28
UBR1Q8IWV7 AC005695.3-201ENST00000614522 232 ntBASIC23.03■■□□□ 1.28
UBR1Q8IWV7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
UBR1Q8IWV7 AC006538.1-201ENST00000567905 1585 ntBASIC23.03■■□□□ 1.28
UBR1Q8IWV7 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
UBR1Q8IWV7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
UBR1Q8IWV7 KRT8P37-201ENST00000451609 1420 ntBASIC23.03■■□□□ 1.28
UBR1Q8IWV7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
UBR1Q8IWV7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC23.03■■□□□ 1.28
UBR1Q8IWV7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
UBR1Q8IWV7 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
UBR1Q8IWV7 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
UBR1Q8IWV7 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC23.02■■□□□ 1.28
UBR1Q8IWV7 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
UBR1Q8IWV7 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
UBR1Q8IWV7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC23.02■■□□□ 1.28
UBR1Q8IWV7 HARS-202ENST00000415192 1401 ntTSL 2 BASIC23.02■■□□□ 1.28
UBR1Q8IWV7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
UBR1Q8IWV7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
UBR1Q8IWV7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
UBR1Q8IWV7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
UBR1Q8IWV7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC23.02■■□□□ 1.28
UBR1Q8IWV7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
UBR1Q8IWV7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
UBR1Q8IWV7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
UBR1Q8IWV7 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
UBR1Q8IWV7 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
UBR1Q8IWV7 CNN2P8-201ENST00000421872 913 ntBASIC23.02■■□□□ 1.28
UBR1Q8IWV7 AC016694.1-201ENST00000434179 700 ntBASIC23.02■■□□□ 1.28
UBR1Q8IWV7 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC23.02■■□□□ 1.28
UBR1Q8IWV7 KRT8P13-201ENST00000463294 1010 ntBASIC23.02■■□□□ 1.28
UBR1Q8IWV7 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC23.02■■□□□ 1.28
UBR1Q8IWV7 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC23.02■■□□□ 1.28
UBR1Q8IWV7 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
UBR1Q8IWV7 AL118558.3-201ENST00000607414 1079 ntBASIC23.02■■□□□ 1.28
UBR1Q8IWV7 PRKN-211ENST00000615065 261 ntTSL 5 BASIC23.02■■□□□ 1.28
UBR1Q8IWV7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC23.02■■□□□ 1.28
UBR1Q8IWV7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC23.02■■□□□ 1.28
UBR1Q8IWV7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
UBR1Q8IWV7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms