Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 AL512652.2-201ENST00000625156 1716 ntBASIC20.47■□□□□ 0.87
COL23A1Q86Y22 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 AC026954.1-201ENST00000429771 1293 ntBASIC20.46■□□□□ 0.87
COL23A1Q86Y22 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 FTH1P14-201ENST00000482930 551 ntBASIC20.46■□□□□ 0.87
COL23A1Q86Y22 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 RIT1-205ENST00000539040 919 ntTSL 2 BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 BRI3BPP1-201ENST00000594224 787 ntBASIC20.46■□□□□ 0.87
COL23A1Q86Y22 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 LINC02012-201ENST00000608206 1725 ntBASIC20.46■□□□□ 0.87
COL23A1Q86Y22 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL23A1Q86Y22 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC20.45■□□□□ 0.86
COL23A1Q86Y22 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL23A1Q86Y22 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL23A1Q86Y22 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.45■□□□□ 0.86
COL23A1Q86Y22 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL23A1Q86Y22 AC092053.1-201ENST00000605787 1936 ntBASIC20.45■□□□□ 0.86
COL23A1Q86Y22 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL23A1Q86Y22 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
COL23A1Q86Y22 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
COL23A1Q86Y22 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL23A1Q86Y22 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL23A1Q86Y22 AC006033.1-201ENST00000440505 426 ntBASIC20.45■□□□□ 0.86
COL23A1Q86Y22 YBX1P6-201ENST00000442962 1002 ntBASIC20.45■□□□□ 0.86
COL23A1Q86Y22 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC20.45■□□□□ 0.86
COL23A1Q86Y22 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC20.45■□□□□ 0.86
COL23A1Q86Y22 PTP4A1P2-201ENST00000546033 454 ntBASIC20.45■□□□□ 0.86
COL23A1Q86Y22 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC20.45■□□□□ 0.86
COL23A1Q86Y22 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC20.45■□□□□ 0.86
COL23A1Q86Y22 AL118558.3-201ENST00000607414 1079 ntBASIC20.45■□□□□ 0.86
COL23A1Q86Y22 AC091271.1-201ENST00000611877 1162 ntBASIC20.45■□□□□ 0.86
COL23A1Q86Y22 AL021578.1-201ENST00000613646 709 ntBASIC20.45■□□□□ 0.86
COL23A1Q86Y22 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL23A1Q86Y22 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL23A1Q86Y22 CYP4F24P-201ENST00000586049 1580 ntBASIC20.45■□□□□ 0.86
COL23A1Q86Y22 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
COL23A1Q86Y22 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
COL23A1Q86Y22 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.45■□□□□ 0.86
COL23A1Q86Y22 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL23A1Q86Y22 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL23A1Q86Y22 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL23A1Q86Y22 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL23A1Q86Y22 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.44■□□□□ 0.86
COL23A1Q86Y22 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
COL23A1Q86Y22 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL23A1Q86Y22 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL23A1Q86Y22 RELA-227ENST00000615805 2236 ntTSL 5 BASIC20.44■□□□□ 0.86
COL23A1Q86Y22 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL23A1Q86Y22 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL23A1Q86Y22 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL23A1Q86Y22 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL23A1Q86Y22 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC20.44■□□□□ 0.86
COL23A1Q86Y22 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL23A1Q86Y22 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC20.44■□□□□ 0.86
COL23A1Q86Y22 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC20.44■□□□□ 0.86
COL23A1Q86Y22 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL23A1Q86Y22 RN7SL560P-201ENST00000577943 264 ntBASIC20.44■□□□□ 0.86
COL23A1Q86Y22 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
COL23A1Q86Y22 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC20.44■□□□□ 0.86
COL23A1Q86Y22 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL23A1Q86Y22 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
COL23A1Q86Y22 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL23A1Q86Y22 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
COL23A1Q86Y22 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC20.44■□□□□ 0.86
COL23A1Q86Y22 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms