Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 TEX28P1-201ENST00000613479 1221 ntBASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 TEX28P2-201ENST00000617764 1221 ntBASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 AC138969.3-201ENST00000546612 1459 ntBASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 AC138932.2-201ENST00000548268 1459 ntBASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 AC126755.4-201ENST00000549796 1459 ntBASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 FER1L4-210ENST00000615531 5998 ntBASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 AC098614.1-201ENST00000368528 745 ntBASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 AL353779.1-201ENST00000434793 351 ntBASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 IGHV3-71-201ENST00000523324 359 ntBASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 AC020765.3-201ENST00000613051 740 ntBASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 AL391256.1-201ENST00000443260 1855 ntBASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 PCDHB17P-201ENST00000539533 2393 ntBASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CCDC149Q6ZUS6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 U91328.1-201ENST00000437528 223 ntBASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 AC009407.1-201ENST00000568958 598 ntBASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 AC024267.1-201ENST00000582320 895 ntBASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC149Q6ZUS6 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms