Protein–RNA interactions for Protein: Q68CJ9

CREB3L3, Cyclic AMP-responsive element-binding protein 3-like protein 3, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L3Q68CJ9 AL591424.1-201ENST00000442569 1213 ntBASIC19.68■□□□□ 0.74
CREB3L3Q68CJ9 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.68■□□□□ 0.74
CREB3L3Q68CJ9 RNA5SP416-201ENST00000516838 111 ntBASIC19.68■□□□□ 0.74
CREB3L3Q68CJ9 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.68■□□□□ 0.74
CREB3L3Q68CJ9 FAM197Y3-203ENST00000618346 717 ntBASIC19.68■□□□□ 0.74
CREB3L3Q68CJ9 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CREB3L3Q68CJ9 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.68■□□□□ 0.74
CREB3L3Q68CJ9 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.68■□□□□ 0.74
CREB3L3Q68CJ9 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CREB3L3Q68CJ9 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CREB3L3Q68CJ9 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.68■□□□□ 0.74
CREB3L3Q68CJ9 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.68■□□□□ 0.74
CREB3L3Q68CJ9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
CREB3L3Q68CJ9 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.68■□□□□ 0.74
CREB3L3Q68CJ9 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CREB3L3Q68CJ9 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CREB3L3Q68CJ9 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CREB3L3Q68CJ9 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CREB3L3Q68CJ9 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CREB3L3Q68CJ9 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CREB3L3Q68CJ9 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CREB3L3Q68CJ9 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CREB3L3Q68CJ9 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CREB3L3Q68CJ9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.67■□□□□ 0.74
CREB3L3Q68CJ9 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CREB3L3Q68CJ9 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CREB3L3Q68CJ9 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CREB3L3Q68CJ9 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CREB3L3Q68CJ9 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CREB3L3Q68CJ9 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CREB3L3Q68CJ9 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CREB3L3Q68CJ9 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CREB3L3Q68CJ9 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CREB3L3Q68CJ9 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.67■□□□□ 0.74
CREB3L3Q68CJ9 AC074386.1-202ENST00000463561 864 ntBASIC19.67■□□□□ 0.74
CREB3L3Q68CJ9 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.67■□□□□ 0.74
CREB3L3Q68CJ9 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CREB3L3Q68CJ9 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.67■□□□□ 0.74
CREB3L3Q68CJ9 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CREB3L3Q68CJ9 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CREB3L3Q68CJ9 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CREB3L3Q68CJ9 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CREB3L3Q68CJ9 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CREB3L3Q68CJ9 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CREB3L3Q68CJ9 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CREB3L3Q68CJ9 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CREB3L3Q68CJ9 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CREB3L3Q68CJ9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.66■□□□□ 0.74
CREB3L3Q68CJ9 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CREB3L3Q68CJ9 AC016027.1-202ENST00000607927 1699 ntBASIC19.66■□□□□ 0.74
CREB3L3Q68CJ9 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
CREB3L3Q68CJ9 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CREB3L3Q68CJ9 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.66■□□□□ 0.74
CREB3L3Q68CJ9 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.66■□□□□ 0.74
CREB3L3Q68CJ9 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
CREB3L3Q68CJ9 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.66■□□□□ 0.74
CREB3L3Q68CJ9 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CREB3L3Q68CJ9 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CREB3L3Q68CJ9 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CREB3L3Q68CJ9 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.66■□□□□ 0.74
CREB3L3Q68CJ9 AP002472.1-201ENST00000577490 586 ntBASIC19.66■□□□□ 0.74
CREB3L3Q68CJ9 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CREB3L3Q68CJ9 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CREB3L3Q68CJ9 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CREB3L3Q68CJ9 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CREB3L3Q68CJ9 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.66■□□□□ 0.74
CREB3L3Q68CJ9 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.66■□□□□ 0.74
CREB3L3Q68CJ9 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CREB3L3Q68CJ9 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CREB3L3Q68CJ9 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CREB3L3Q68CJ9 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CREB3L3Q68CJ9 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.66■□□□□ 0.74
CREB3L3Q68CJ9 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CREB3L3Q68CJ9 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.65■□□□□ 0.74
CREB3L3Q68CJ9 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CREB3L3Q68CJ9 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CREB3L3Q68CJ9 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.65■□□□□ 0.74
CREB3L3Q68CJ9 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.65■□□□□ 0.74
CREB3L3Q68CJ9 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CREB3L3Q68CJ9 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CREB3L3Q68CJ9 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CREB3L3Q68CJ9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CREB3L3Q68CJ9 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.65■□□□□ 0.74
CREB3L3Q68CJ9 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CREB3L3Q68CJ9 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CREB3L3Q68CJ9 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
CREB3L3Q68CJ9 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CREB3L3Q68CJ9 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CREB3L3Q68CJ9 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CREB3L3Q68CJ9 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CREB3L3Q68CJ9 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.65■□□□□ 0.74
CREB3L3Q68CJ9 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CREB3L3Q68CJ9 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.65■□□□□ 0.74
CREB3L3Q68CJ9 AC068137.2-201ENST00000605408 478 ntBASIC19.65■□□□□ 0.74
CREB3L3Q68CJ9 AL078644.1-201ENST00000609881 752 ntBASIC19.65■□□□□ 0.74
CREB3L3Q68CJ9 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.65■□□□□ 0.74
CREB3L3Q68CJ9 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.65■□□□□ 0.74
CREB3L3Q68CJ9 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CREB3L3Q68CJ9 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.65■□□□□ 0.74
CREB3L3Q68CJ9 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms