Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 AC239800.4-201ENST00000603712 296 ntBASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 AL133215.2-201ENST00000609242 977 ntBASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 TEX28P1-201ENST00000613479 1221 ntBASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 TEX28P2-201ENST00000617764 1221 ntBASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 GGT4P-201ENST00000623672 1708 ntBASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 GPAA1P2-202ENST00000606848 1787 ntBASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 AC022144.1-201ENST00000602255 1580 ntBASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 AC005915.1-201ENST00000624912 2018 ntBASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 AL035456.1-201ENST00000456064 1369 ntBASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNFT1Q5M7Z0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 AL589739.1-201ENST00000607720 493 ntBASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNFT1Q5M7Z0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
RNFT1Q5M7Z0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.83□□□□□ -0.03
RNFT1Q5M7Z0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RNFT1Q5M7Z0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.83□□□□□ -0.03
RNFT1Q5M7Z0 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RNFT1Q5M7Z0 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RNFT1Q5M7Z0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.83□□□□□ -0.03
RNFT1Q5M7Z0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RNFT1Q5M7Z0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RNFT1Q5M7Z0 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms