Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDR1Q08345 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDR1Q08345 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDR1Q08345 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.31■□□□□ 0.84
DDR1Q08345 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.31■□□□□ 0.84
DDR1Q08345 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DDR1Q08345 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDR1Q08345 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.3■□□□□ 0.84
DDR1Q08345 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDR1Q08345 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDR1Q08345 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DDR1Q08345 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DDR1Q08345 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.3■□□□□ 0.84
DDR1Q08345 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
DDR1Q08345 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DDR1Q08345 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.3■□□□□ 0.84
DDR1Q08345 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
DDR1Q08345 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDR1Q08345 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDR1Q08345 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DDR1Q08345 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDR1Q08345 AC092933.1-201ENST00000393644 945 ntBASIC20.3■□□□□ 0.84
DDR1Q08345 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DDR1Q08345 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC20.3■□□□□ 0.84
DDR1Q08345 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC20.3■□□□□ 0.84
DDR1Q08345 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC20.3■□□□□ 0.84
DDR1Q08345 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDR1Q08345 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC20.3■□□□□ 0.84
DDR1Q08345 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC20.3■□□□□ 0.84
DDR1Q08345 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC20.3■□□□□ 0.84
DDR1Q08345 GPAA1P2-202ENST00000606848 1787 ntBASIC20.3■□□□□ 0.84
DDR1Q08345 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
DDR1Q08345 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
DDR1Q08345 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
DDR1Q08345 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDR1Q08345 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDR1Q08345 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDR1Q08345 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.3■□□□□ 0.84
DDR1Q08345 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
DDR1Q08345 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDR1Q08345 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
DDR1Q08345 DEK-201ENST00000244776 1441 ntTSL 2 BASIC20.29■□□□□ 0.84
DDR1Q08345 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
DDR1Q08345 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDR1Q08345 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DDR1Q08345 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDR1Q08345 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.29■□□□□ 0.84
DDR1Q08345 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC20.29■□□□□ 0.84
DDR1Q08345 AL391256.1-201ENST00000443260 1855 ntBASIC20.29■□□□□ 0.84
DDR1Q08345 AC134043.2-201ENST00000624206 2238 ntBASIC20.29■□□□□ 0.84
DDR1Q08345 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DDR1Q08345 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDR1Q08345 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDR1Q08345 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC20.29■□□□□ 0.84
DDR1Q08345 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
DDR1Q08345 BCYRN1-201ENST00000418539 200 ntBASIC20.29■□□□□ 0.84
DDR1Q08345 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC20.29■□□□□ 0.84
DDR1Q08345 KLF2P4-201ENST00000451959 1225 ntBASIC20.29■□□□□ 0.84
DDR1Q08345 RN7SL399P-201ENST00000471648 279 ntBASIC20.29■□□□□ 0.84
DDR1Q08345 HNRNPA1P13-201ENST00000510646 963 ntBASIC20.29■□□□□ 0.84
DDR1Q08345 LINC01115-203ENST00000606068 577 ntBASIC20.29■□□□□ 0.84
DDR1Q08345 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
DDR1Q08345 AL031731.1-201ENST00000642131 2094 ntBASIC20.29■□□□□ 0.84
DDR1Q08345 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
DDR1Q08345 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
DDR1Q08345 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDR1Q08345 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDR1Q08345 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDR1Q08345 TUBB1P2-201ENST00000422712 1306 ntBASIC20.28■□□□□ 0.84
DDR1Q08345 TUBB1P1-201ENST00000503144 1300 ntBASIC20.28■□□□□ 0.84
DDR1Q08345 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDR1Q08345 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDR1Q08345 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DDR1Q08345 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDR1Q08345 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.28■□□□□ 0.84
DDR1Q08345 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
DDR1Q08345 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDR1Q08345 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDR1Q08345 LBX2-201ENST00000341396 886 ntTSL 3 BASIC20.28■□□□□ 0.84
DDR1Q08345 HAUS4P1-201ENST00000406739 1145 ntBASIC20.28■□□□□ 0.84
DDR1Q08345 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC20.28■□□□□ 0.84
DDR1Q08345 USB1-202ENST00000423271 1217 ntTSL 2 BASIC20.28■□□□□ 0.84
DDR1Q08345 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
DDR1Q08345 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC20.28■□□□□ 0.84
DDR1Q08345 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
DDR1Q08345 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC20.28■□□□□ 0.84
DDR1Q08345 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC20.28■□□□□ 0.84
DDR1Q08345 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC20.28■□□□□ 0.84
DDR1Q08345 AC020907.1-201ENST00000616460 1350 ntBASIC20.28■□□□□ 0.84
DDR1Q08345 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDR1Q08345 CYP4F24P-201ENST00000586049 1580 ntBASIC20.28■□□□□ 0.84
DDR1Q08345 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DDR1Q08345 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC20.28■□□□□ 0.84
DDR1Q08345 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDR1Q08345 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.28■□□□□ 0.84
DDR1Q08345 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDR1Q08345 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDR1Q08345 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DDR1Q08345 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDR1Q08345 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms