Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
PCDH1Q08174 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH1Q08174 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH1Q08174 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDH1Q08174 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH1Q08174 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH1Q08174 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH1Q08174 DOC2GP-204ENST00000639052 2548 ntBASIC15.99■□□□□ 0.15
PCDH1Q08174 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH1Q08174 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH1Q08174 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH1Q08174 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDH1Q08174 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
PCDH1Q08174 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH1Q08174 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH1Q08174 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH1Q08174 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH1Q08174 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PCDH1Q08174 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDH1Q08174 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDH1Q08174 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDH1Q08174 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.99■□□□□ 0.15
PCDH1Q08174 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDH1Q08174 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.99■□□□□ 0.15
PCDH1Q08174 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
PCDH1Q08174 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH1Q08174 AL031055.1-201ENST00000606362 631 ntBASIC15.99■□□□□ 0.15
PCDH1Q08174 AC007064.4-201ENST00000637740 555 ntBASIC15.99■□□□□ 0.15
PCDH1Q08174 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDH1Q08174 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDH1Q08174 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PCDH1Q08174 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDH1Q08174 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH1Q08174 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH1Q08174 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH1Q08174 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH1Q08174 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH1Q08174 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH1Q08174 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDH1Q08174 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PCDH1Q08174 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
PCDH1Q08174 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDH1Q08174 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PCDH1Q08174 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PCDH1Q08174 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH1Q08174 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH1Q08174 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDH1Q08174 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PCDH1Q08174 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDH1Q08174 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH1Q08174 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH1Q08174 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH1Q08174 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH1Q08174 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH1Q08174 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH1Q08174 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH1Q08174 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PCDH1Q08174 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDH1Q08174 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDH1Q08174 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH1Q08174 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH1Q08174 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
PCDH1Q08174 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PCDH1Q08174 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.98■□□□□ 0.15
PCDH1Q08174 AL513523.2-202ENST00000427283 2040 ntBASIC15.98■□□□□ 0.15
PCDH1Q08174 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDH1Q08174 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDH1Q08174 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.98■□□□□ 0.15
PCDH1Q08174 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDH1Q08174 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.98■□□□□ 0.15
PCDH1Q08174 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDH1Q08174 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.98■□□□□ 0.15
PCDH1Q08174 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDH1Q08174 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH1Q08174 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDH1Q08174 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH1Q08174 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH1Q08174 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH1Q08174 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH1Q08174 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH1Q08174 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH1Q08174 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.98■□□□□ 0.15
PCDH1Q08174 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH1Q08174 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDH1Q08174 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH1Q08174 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
PCDH1Q08174 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH1Q08174 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDH1Q08174 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH1Q08174 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH1Q08174 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH1Q08174 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH1Q08174 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH1Q08174 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH1Q08174 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDH1Q08174 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDH1Q08174 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDH1Q08174 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDH1Q08174 AC092474.2-201ENST00000424288 719 ntBASIC15.97■□□□□ 0.15
PCDH1Q08174 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms