Protein–RNA interactions for Protein: P98194

ATP2C1, Calcium-transporting ATPase type 2C member 1, humanhuman

Predicted RBP Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1P98194 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2C1P98194 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2C1P98194 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.66■□□□□ 0.58
ATP2C1P98194 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2C1P98194 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2C1P98194 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ATP2C1P98194 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.66■□□□□ 0.58
ATP2C1P98194 KRT18P34-201ENST00000488218 1270 ntBASIC18.66■□□□□ 0.58
ATP2C1P98194 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.66■□□□□ 0.58
ATP2C1P98194 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.66■□□□□ 0.58
ATP2C1P98194 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2C1P98194 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ATP2C1P98194 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.66■□□□□ 0.58
ATP2C1P98194 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2C1P98194 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2C1P98194 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2C1P98194 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2C1P98194 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.66■□□□□ 0.58
ATP2C1P98194 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.66■□□□□ 0.58
ATP2C1P98194 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2C1P98194 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
ATP2C1P98194 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.66■□□□□ 0.58
ATP2C1P98194 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2C1P98194 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP2C1P98194 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP2C1P98194 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2C1P98194 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2C1P98194 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2C1P98194 MIR574-201ENST00000385209 96 ntBASIC18.65■□□□□ 0.58
ATP2C1P98194 AL022342.1-201ENST00000400363 863 ntBASIC18.65■□□□□ 0.58
ATP2C1P98194 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ATP2C1P98194 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP2C1P98194 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP2C1P98194 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2C1P98194 PGAM5P1-201ENST00000518923 814 ntBASIC18.65■□□□□ 0.58
ATP2C1P98194 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2C1P98194 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2C1P98194 AL161645.1-201ENST00000622716 1255 ntBASIC18.65■□□□□ 0.58
ATP2C1P98194 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP2C1P98194 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2C1P98194 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2C1P98194 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2C1P98194 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2C1P98194 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ATP2C1P98194 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP2C1P98194 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2C1P98194 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2C1P98194 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2C1P98194 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.65■□□□□ 0.58
ATP2C1P98194 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP2C1P98194 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2C1P98194 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2C1P98194 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ATP2C1P98194 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2C1P98194 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2C1P98194 WASH6P-202ENST00000359512 1437 ntBASIC18.65■□□□□ 0.58
ATP2C1P98194 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
ATP2C1P98194 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2C1P98194 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ATP2C1P98194 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATP2C1P98194 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
ATP2C1P98194 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
ATP2C1P98194 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ATP2C1P98194 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.64■□□□□ 0.57
ATP2C1P98194 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP2C1P98194 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP2C1P98194 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.64■□□□□ 0.57
ATP2C1P98194 AC002056.1-201ENST00000395613 760 ntBASIC18.64■□□□□ 0.57
ATP2C1P98194 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.64■□□□□ 0.57
ATP2C1P98194 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2C1P98194 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ATP2C1P98194 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ATP2C1P98194 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2C1P98194 AL671883.3-201ENST00000603274 991 ntBASIC18.64■□□□□ 0.57
ATP2C1P98194 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ATP2C1P98194 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2C1P98194 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ATP2C1P98194 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ATP2C1P98194 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2C1P98194 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
ATP2C1P98194 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ATP2C1P98194 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.64■□□□□ 0.57
ATP2C1P98194 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2C1P98194 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2C1P98194 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2C1P98194 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2C1P98194 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.64■□□□□ 0.57
ATP2C1P98194 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ATP2C1P98194 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.63■□□□□ 0.57
ATP2C1P98194 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2C1P98194 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2C1P98194 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.63■□□□□ 0.57
ATP2C1P98194 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2C1P98194 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2C1P98194 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ATP2C1P98194 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2C1P98194 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2C1P98194 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.63■□□□□ 0.57
ATP2C1P98194 AC023274.1-201ENST00000418278 595 ntBASIC18.63■□□□□ 0.57
ATP2C1P98194 KRT18P58-201ENST00000527480 1120 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms