Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.49□□□□□ -0.09
HIST1H3AP68431 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.49□□□□□ -0.09
HIST1H3AP68431 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.49□□□□□ -0.09
HIST1H3AP68431 AC007064.4-201ENST00000637740 555 ntBASIC14.49□□□□□ -0.09
HIST1H3AP68431 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H3AP68431 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H3AP68431 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.49□□□□□ -0.09
HIST1H3AP68431 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H3AP68431 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H3AP68431 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.49□□□□□ -0.09
HIST1H3AP68431 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.49□□□□□ -0.09
HIST1H3AP68431 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.49□□□□□ -0.09
HIST1H3AP68431 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
HIST1H3AP68431 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H3AP68431 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H3AP68431 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.49□□□□□ -0.09
HIST1H3AP68431 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.49□□□□□ -0.09
HIST1H3AP68431 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
HIST1H3AP68431 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.48□□□□□ -0.09
HIST1H3AP68431 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
HIST1H3AP68431 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
HIST1H3AP68431 IL9RP2-201ENST00000423948 1312 ntBASIC14.48□□□□□ -0.09
HIST1H3AP68431 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HIST1H3AP68431 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.48□□□□□ -0.09
HIST1H3AP68431 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
HIST1H3AP68431 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
HIST1H3AP68431 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.48□□□□□ -0.09
HIST1H3AP68431 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.48□□□□□ -0.09
HIST1H3AP68431 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.48□□□□□ -0.09
HIST1H3AP68431 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.48□□□□□ -0.09
HIST1H3AP68431 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.48□□□□□ -0.09
HIST1H3AP68431 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.48□□□□□ -0.09
HIST1H3AP68431 AC023141.13-201ENST00000604991 943 ntBASIC14.48□□□□□ -0.09
HIST1H3AP68431 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.48□□□□□ -0.09
HIST1H3AP68431 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.48□□□□□ -0.09
HIST1H3AP68431 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.48□□□□□ -0.09
HIST1H3AP68431 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.48□□□□□ -0.09
HIST1H3AP68431 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.48□□□□□ -0.09
HIST1H3AP68431 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.48□□□□□ -0.09
HIST1H3AP68431 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 AC104109.2-201ENST00000602919 1418 ntBASIC14.48□□□□□ -0.09
HIST1H3AP68431 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H3AP68431 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
HIST1H3AP68431 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H3AP68431 AL513477.1-201ENST00000602865 2407 ntBASIC14.47□□□□□ -0.09
HIST1H3AP68431 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.47□□□□□ -0.09
HIST1H3AP68431 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
HIST1H3AP68431 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H3AP68431 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H3AP68431 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
HIST1H3AP68431 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
HIST1H3AP68431 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H3AP68431 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.47□□□□□ -0.09
HIST1H3AP68431 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H3AP68431 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
HIST1H3AP68431 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H3AP68431 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H3AP68431 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H3AP68431 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.47□□□□□ -0.09
HIST1H3AP68431 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H3AP68431 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H3AP68431 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H3AP68431 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
HIST1H3AP68431 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H3AP68431 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.47□□□□□ -0.09
HIST1H3AP68431 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H3AP68431 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.47□□□□□ -0.09
HIST1H3AP68431 RPL13AP23-201ENST00000480739 586 ntBASIC14.47□□□□□ -0.09
HIST1H3AP68431 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HIST1H3AP68431 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
HIST1H3AP68431 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms