Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.19■□□□□ 0.82
PDE1AP54750 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.19■□□□□ 0.82
PDE1AP54750 PGAM5P1-201ENST00000518923 814 ntBASIC20.19■□□□□ 0.82
PDE1AP54750 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.19■□□□□ 0.82
PDE1AP54750 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.19■□□□□ 0.82
PDE1AP54750 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.19■□□□□ 0.82
PDE1AP54750 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.19■□□□□ 0.82
PDE1AP54750 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDE1AP54750 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDE1AP54750 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDE1AP54750 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
PDE1AP54750 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PDE1AP54750 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDE1AP54750 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
PDE1AP54750 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
PDE1AP54750 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDE1AP54750 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDE1AP54750 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDE1AP54750 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDE1AP54750 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PDE1AP54750 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PDE1AP54750 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDE1AP54750 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC20.18■□□□□ 0.82
PDE1AP54750 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDE1AP54750 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDE1AP54750 AC023274.1-201ENST00000418278 595 ntBASIC20.18■□□□□ 0.82
PDE1AP54750 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PDE1AP54750 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.18■□□□□ 0.82
PDE1AP54750 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.18■□□□□ 0.82
PDE1AP54750 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.18■□□□□ 0.82
PDE1AP54750 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.18■□□□□ 0.82
PDE1AP54750 AC099522.2-201ENST00000607001 744 ntBASIC20.18■□□□□ 0.82
PDE1AP54750 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDE1AP54750 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDE1AP54750 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.18■□□□□ 0.82
PDE1AP54750 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC20.18■□□□□ 0.82
PDE1AP54750 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDE1AP54750 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC20.18■□□□□ 0.82
PDE1AP54750 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDE1AP54750 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC20.18■□□□□ 0.82
PDE1AP54750 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC20.18■□□□□ 0.82
PDE1AP54750 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
PDE1AP54750 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PDE1AP54750 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PDE1AP54750 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDE1AP54750 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDE1AP54750 RELA-227ENST00000615805 2236 ntTSL 5 BASIC20.18■□□□□ 0.82
PDE1AP54750 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC20.18■□□□□ 0.82
PDE1AP54750 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDE1AP54750 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC20.18■□□□□ 0.82
PDE1AP54750 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC20.18■□□□□ 0.82
PDE1AP54750 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDE1AP54750 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDE1AP54750 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.18■□□□□ 0.82
PDE1AP54750 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.17■□□□□ 0.82
PDE1AP54750 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDE1AP54750 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE1AP54750 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE1AP54750 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDE1AP54750 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PDE1AP54750 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDE1AP54750 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PDE1AP54750 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC20.17■□□□□ 0.82
PDE1AP54750 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDE1AP54750 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE1AP54750 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE1AP54750 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC20.17■□□□□ 0.82
PDE1AP54750 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE1AP54750 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDE1AP54750 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PDE1AP54750 MIR940-201ENST00000401276 94 ntBASIC20.17■□□□□ 0.82
PDE1AP54750 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.17■□□□□ 0.82
PDE1AP54750 AC093724.1-201ENST00000448659 1027 ntBASIC20.17■□□□□ 0.82
PDE1AP54750 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDE1AP54750 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.17■□□□□ 0.82
PDE1AP54750 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDE1AP54750 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.17■□□□□ 0.82
PDE1AP54750 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.17■□□□□ 0.82
PDE1AP54750 SP100-205ENST00000409824 1802 ntTSL 5 BASIC20.17■□□□□ 0.82
PDE1AP54750 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE1AP54750 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PDE1AP54750 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDE1AP54750 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.17■□□□□ 0.82
PDE1AP54750 AL592424.1-201ENST00000563624 1536 ntBASIC20.17■□□□□ 0.82
PDE1AP54750 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PDE1AP54750 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDE1AP54750 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC20.16■□□□□ 0.82
PDE1AP54750 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDE1AP54750 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PDE1AP54750 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDE1AP54750 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDE1AP54750 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PDE1AP54750 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDE1AP54750 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDE1AP54750 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.16■□□□□ 0.82
PDE1AP54750 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.16■□□□□ 0.82
PDE1AP54750 AP000347.1-202ENST00000435868 847 ntBASIC20.16■□□□□ 0.82
PDE1AP54750 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDE1AP54750 KRT18P34-201ENST00000488218 1270 ntBASIC20.16■□□□□ 0.82
PDE1AP54750 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms