Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LBX1P52954 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LBX1P52954 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LBX1P52954 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LBX1P52954 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LBX1P52954 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
LBX1P52954 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LBX1P52954 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LBX1P52954 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
LBX1P52954 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.36■□□□□ 0.53
LBX1P52954 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC18.36■□□□□ 0.53
LBX1P52954 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC18.36■□□□□ 0.53
LBX1P52954 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.36■□□□□ 0.53
LBX1P52954 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC18.36■□□□□ 0.53
LBX1P52954 CYP51A1P3-201ENST00000400072 1428 ntBASIC18.36■□□□□ 0.53
LBX1P52954 MIR1202-201ENST00000408529 83 ntBASIC18.36■□□□□ 0.53
LBX1P52954 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LBX1P52954 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC18.36■□□□□ 0.53
LBX1P52954 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LBX1P52954 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.36■□□□□ 0.53
LBX1P52954 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
LBX1P52954 AL596276.2-201ENST00000447525 331 ntBASIC18.36■□□□□ 0.53
LBX1P52954 AC093724.1-201ENST00000448659 1027 ntBASIC18.36■□□□□ 0.53
LBX1P52954 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LBX1P52954 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC18.36■□□□□ 0.53
LBX1P52954 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LBX1P52954 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC18.36■□□□□ 0.53
LBX1P52954 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LBX1P52954 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
LBX1P52954 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC18.36■□□□□ 0.53
LBX1P52954 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LBX1P52954 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC18.36■□□□□ 0.53
LBX1P52954 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.36■□□□□ 0.53
LBX1P52954 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.35■□□□□ 0.53
LBX1P52954 AL671710.1-201ENST00000610245 2349 ntBASIC18.35■□□□□ 0.53
LBX1P52954 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
LBX1P52954 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.35■□□□□ 0.53
LBX1P52954 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LBX1P52954 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.35■□□□□ 0.53
LBX1P52954 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.35■□□□□ 0.53
LBX1P52954 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LBX1P52954 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LBX1P52954 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LBX1P52954 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LBX1P52954 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LBX1P52954 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LBX1P52954 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LBX1P52954 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LBX1P52954 NKAIN1P1-201ENST00000435754 582 ntBASIC18.35■□□□□ 0.53
LBX1P52954 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LBX1P52954 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC18.35■□□□□ 0.53
LBX1P52954 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.35■□□□□ 0.53
LBX1P52954 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
LBX1P52954 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC18.35■□□□□ 0.53
LBX1P52954 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
LBX1P52954 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC18.35■□□□□ 0.53
LBX1P52954 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.35■□□□□ 0.53
LBX1P52954 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LBX1P52954 AP001527.2-201ENST00000614441 631 ntBASIC18.35■□□□□ 0.53
LBX1P52954 AC145423.3-201ENST00000615987 467 ntBASIC18.35■□□□□ 0.53
LBX1P52954 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LBX1P52954 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LBX1P52954 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LBX1P52954 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LBX1P52954 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.35■□□□□ 0.53
LBX1P52954 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.35■□□□□ 0.53
LBX1P52954 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LBX1P52954 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LBX1P52954 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.35■□□□□ 0.53
LBX1P52954 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LBX1P52954 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LBX1P52954 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LBX1P52954 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LBX1P52954 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.34■□□□□ 0.53
LBX1P52954 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC18.34■□□□□ 0.53
LBX1P52954 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LBX1P52954 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
LBX1P52954 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LBX1P52954 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LBX1P52954 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LBX1P52954 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
LBX1P52954 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LBX1P52954 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LBX1P52954 VDAC1P7-201ENST00000462417 847 ntBASIC18.34■□□□□ 0.53
LBX1P52954 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LBX1P52954 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC18.34■□□□□ 0.53
LBX1P52954 AC044849.1-201ENST00000519737 1188 ntBASIC18.34■□□□□ 0.53
LBX1P52954 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.34■□□□□ 0.53
LBX1P52954 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LBX1P52954 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LBX1P52954 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC18.34■□□□□ 0.53
LBX1P52954 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LBX1P52954 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC18.34■□□□□ 0.53
LBX1P52954 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC18.34■□□□□ 0.53
LBX1P52954 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LBX1P52954 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LBX1P52954 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LBX1P52954 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LBX1P52954 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LBX1P52954 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms