Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.93■□□□□ 0.46
PDE6CP51160 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6CP51160 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6CP51160 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6CP51160 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.93■□□□□ 0.46
PDE6CP51160 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.93■□□□□ 0.46
PDE6CP51160 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.93■□□□□ 0.46
PDE6CP51160 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PDE6CP51160 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6CP51160 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6CP51160 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6CP51160 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6CP51160 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6CP51160 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6CP51160 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6CP51160 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PDE6CP51160 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6CP51160 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.92■□□□□ 0.46
PDE6CP51160 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.92■□□□□ 0.46
PDE6CP51160 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.92■□□□□ 0.46
PDE6CP51160 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.92■□□□□ 0.46
PDE6CP51160 C20orf181-201ENST00000623918 480 ntBASIC17.92■□□□□ 0.46
PDE6CP51160 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6CP51160 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6CP51160 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PDE6CP51160 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.92■□□□□ 0.46
PDE6CP51160 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6CP51160 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
PDE6CP51160 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6CP51160 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
PDE6CP51160 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.92■□□□□ 0.46
PDE6CP51160 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.92■□□□□ 0.46
PDE6CP51160 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.92■□□□□ 0.46
PDE6CP51160 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.92■□□□□ 0.46
PDE6CP51160 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PDE6CP51160 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6CP51160 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6CP51160 ALOX12P2-203ENST00000570921 1945 ntBASIC17.92■□□□□ 0.46
PDE6CP51160 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.92■□□□□ 0.46
PDE6CP51160 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6CP51160 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6CP51160 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.91■□□□□ 0.46
PDE6CP51160 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.91■□□□□ 0.46
PDE6CP51160 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6CP51160 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.91■□□□□ 0.46
PDE6CP51160 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6CP51160 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6CP51160 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
PDE6CP51160 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.91■□□□□ 0.46
PDE6CP51160 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
PDE6CP51160 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6CP51160 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6CP51160 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6CP51160 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6CP51160 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6CP51160 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6CP51160 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.91■□□□□ 0.46
PDE6CP51160 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PDE6CP51160 AL671710.1-201ENST00000610245 2349 ntBASIC17.91■□□□□ 0.46
PDE6CP51160 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PDE6CP51160 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6CP51160 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.91■□□□□ 0.46
PDE6CP51160 IGLL3P-201ENST00000412472 434 ntBASIC17.91■□□□□ 0.46
PDE6CP51160 AC211486.1-202ENST00000416371 468 ntBASIC17.91■□□□□ 0.46
PDE6CP51160 MKNK2P1-201ENST00000437526 628 ntBASIC17.91■□□□□ 0.46
PDE6CP51160 RHOQP3-201ENST00000437982 621 ntBASIC17.91■□□□□ 0.46
PDE6CP51160 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.91■□□□□ 0.46
PDE6CP51160 AC211476.1-201ENST00000503899 468 ntBASIC17.91■□□□□ 0.46
PDE6CP51160 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.91■□□□□ 0.46
PDE6CP51160 AC087641.1-201ENST00000557561 1021 ntBASIC17.91■□□□□ 0.46
PDE6CP51160 PDPK2P-202ENST00000562415 1191 ntBASIC17.91■□□□□ 0.46
PDE6CP51160 AC018845.2-201ENST00000568326 409 ntBASIC17.91■□□□□ 0.46
PDE6CP51160 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.91■□□□□ 0.46
PDE6CP51160 CYP2A7P1-201ENST00000595391 815 ntBASIC17.91■□□□□ 0.46
PDE6CP51160 AC023141.13-201ENST00000604991 943 ntBASIC17.91■□□□□ 0.46
PDE6CP51160 AP001350.2-201ENST00000625104 1094 ntBASIC17.91■□□□□ 0.46
PDE6CP51160 AC010507.1-201ENST00000633895 436 ntBASIC17.91■□□□□ 0.46
PDE6CP51160 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6CP51160 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.91■□□□□ 0.46
PDE6CP51160 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6CP51160 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6CP51160 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6CP51160 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
PDE6CP51160 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6CP51160 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6CP51160 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.91■□□□□ 0.46
PDE6CP51160 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDE6CP51160 AL662844.4-201ENST00000606367 2838 ntBASIC17.9■□□□□ 0.46
PDE6CP51160 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDE6CP51160 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDE6CP51160 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDE6CP51160 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDE6CP51160 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDE6CP51160 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDE6CP51160 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.9■□□□□ 0.46
PDE6CP51160 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDE6CP51160 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDE6CP51160 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.9■□□□□ 0.46
PDE6CP51160 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDE6CP51160 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms