Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 RN7SL752P-201ENST00000463779 287 ntBASIC18.21■□□□□ 0.51
CPT1AP50416 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.21■□□□□ 0.51
CPT1AP50416 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CPT1AP50416 GIMAP3P-201ENST00000495150 836 ntBASIC18.21■□□□□ 0.51
CPT1AP50416 AC011495.1-201ENST00000498085 584 ntBASIC18.21■□□□□ 0.51
CPT1AP50416 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CPT1AP50416 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.21■□□□□ 0.51
CPT1AP50416 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPT1AP50416 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.21■□□□□ 0.51
CPT1AP50416 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.21■□□□□ 0.51
CPT1AP50416 MIR6069-201ENST00000620069 79 ntBASIC18.21■□□□□ 0.51
CPT1AP50416 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CPT1AP50416 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CPT1AP50416 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.21■□□□□ 0.51
CPT1AP50416 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CPT1AP50416 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.21■□□□□ 0.51
CPT1AP50416 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CPT1AP50416 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CPT1AP50416 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CPT1AP50416 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPT1AP50416 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPT1AP50416 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPT1AP50416 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CPT1AP50416 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CPT1AP50416 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
CPT1AP50416 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.2■□□□□ 0.5
CPT1AP50416 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CPT1AP50416 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPT1AP50416 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.2■□□□□ 0.5
CPT1AP50416 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.2■□□□□ 0.5
CPT1AP50416 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPT1AP50416 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.2■□□□□ 0.5
CPT1AP50416 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.2■□□□□ 0.5
CPT1AP50416 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPT1AP50416 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPT1AP50416 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CPT1AP50416 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPT1AP50416 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.2■□□□□ 0.5
CPT1AP50416 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
CPT1AP50416 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CPT1AP50416 U91328.1-201ENST00000437528 223 ntBASIC18.2■□□□□ 0.5
CPT1AP50416 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.2■□□□□ 0.5
CPT1AP50416 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPT1AP50416 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.2■□□□□ 0.5
CPT1AP50416 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.2■□□□□ 0.5
CPT1AP50416 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPT1AP50416 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.2■□□□□ 0.5
CPT1AP50416 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.2■□□□□ 0.5
CPT1AP50416 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.2■□□□□ 0.5
CPT1AP50416 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPT1AP50416 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CPT1AP50416 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.2■□□□□ 0.5
CPT1AP50416 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPT1AP50416 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CPT1AP50416 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPT1AP50416 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPT1AP50416 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPT1AP50416 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CPT1AP50416 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPT1AP50416 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.19■□□□□ 0.5
CPT1AP50416 AC141586.5-201ENST00000624546 2050 ntBASIC18.19■□□□□ 0.5
CPT1AP50416 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPT1AP50416 SLC7A15P-201ENST00000424028 1363 ntBASIC18.19■□□□□ 0.5
CPT1AP50416 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPT1AP50416 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CPT1AP50416 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPT1AP50416 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CPT1AP50416 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CPT1AP50416 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CPT1AP50416 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPT1AP50416 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPT1AP50416 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CPT1AP50416 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.19■□□□□ 0.5
CPT1AP50416 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPT1AP50416 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.19■□□□□ 0.5
CPT1AP50416 ARSEP1-201ENST00000420443 635 ntBASIC18.19■□□□□ 0.5
CPT1AP50416 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.19■□□□□ 0.5
CPT1AP50416 MEP1AP4-201ENST00000423244 1087 ntBASIC18.19■□□□□ 0.5
CPT1AP50416 AC007274.1-201ENST00000439805 662 ntBASIC18.19■□□□□ 0.5
CPT1AP50416 INE1-201ENST00000456273 945 ntBASIC18.19■□□□□ 0.5
CPT1AP50416 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CPT1AP50416 SPDYE18-201ENST00000510091 1050 ntBASIC18.19■□□□□ 0.5
CPT1AP50416 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.19■□□□□ 0.5
CPT1AP50416 AC055876.2-201ENST00000531834 546 ntBASIC18.19■□□□□ 0.5
CPT1AP50416 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.19■□□□□ 0.5
CPT1AP50416 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.19■□□□□ 0.5
CPT1AP50416 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.19■□□□□ 0.5
CPT1AP50416 SRD5A3P1-201ENST00000603021 949 ntBASIC18.19■□□□□ 0.5
CPT1AP50416 AC008494.3-201ENST00000606615 944 ntBASIC18.19■□□□□ 0.5
CPT1AP50416 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.19■□□□□ 0.5
CPT1AP50416 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.19■□□□□ 0.5
CPT1AP50416 GGT4P-201ENST00000623672 1708 ntBASIC18.19■□□□□ 0.5
CPT1AP50416 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPT1AP50416 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CPT1AP50416 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.19■□□□□ 0.5
CPT1AP50416 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.19■□□□□ 0.5
CPT1AP50416 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPT1AP50416 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CPT1AP50416 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.19■□□□□ 0.5
CPT1AP50416 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms