Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEDD4P46934 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.44■□□□□ 0.7
NEDD4P46934 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
NEDD4P46934 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NEDD4P46934 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.44■□□□□ 0.7
NEDD4P46934 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NEDD4P46934 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.44■□□□□ 0.7
NEDD4P46934 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEDD4P46934 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEDD4P46934 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEDD4P46934 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEDD4P46934 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NEDD4P46934 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEDD4P46934 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEDD4P46934 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEDD4P46934 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEDD4P46934 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEDD4P46934 AC138932.1-201ENST00000534164 6830 ntBASIC19.44■□□□□ 0.7
NEDD4P46934 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NEDD4P46934 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.44■□□□□ 0.7
NEDD4P46934 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.44■□□□□ 0.7
NEDD4P46934 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.44■□□□□ 0.7
NEDD4P46934 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.44■□□□□ 0.7
NEDD4P46934 GPS2P2-201ENST00000430745 888 ntBASIC19.44■□□□□ 0.7
NEDD4P46934 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.44■□□□□ 0.7
NEDD4P46934 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.44■□□□□ 0.7
NEDD4P46934 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.44■□□□□ 0.7
NEDD4P46934 AC023141.5-201ENST00000458585 616 ntBASIC19.44■□□□□ 0.7
NEDD4P46934 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.44■□□□□ 0.7
NEDD4P46934 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.44■□□□□ 0.7
NEDD4P46934 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NEDD4P46934 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NEDD4P46934 SLC25A39P2-201ENST00000537614 270 ntBASIC19.44■□□□□ 0.7
NEDD4P46934 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.44■□□□□ 0.7
NEDD4P46934 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEDD4P46934 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NEDD4P46934 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.44■□□□□ 0.7
NEDD4P46934 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEDD4P46934 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.43■□□□□ 0.7
NEDD4P46934 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEDD4P46934 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
NEDD4P46934 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NEDD4P46934 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.43■□□□□ 0.7
NEDD4P46934 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NEDD4P46934 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NEDD4P46934 UXT-AS1-201ENST00000590504 1525 ntBASIC19.43■□□□□ 0.7
NEDD4P46934 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
NEDD4P46934 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.43■□□□□ 0.7
NEDD4P46934 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEDD4P46934 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.43■□□□□ 0.7
NEDD4P46934 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
NEDD4P46934 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.43■□□□□ 0.7
NEDD4P46934 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEDD4P46934 MIR346-201ENST00000362234 95 ntBASIC19.43■□□□□ 0.7
NEDD4P46934 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NEDD4P46934 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NEDD4P46934 AC005237.2-201ENST00000434368 219 ntBASIC19.43■□□□□ 0.7
NEDD4P46934 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.43■□□□□ 0.7
NEDD4P46934 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.43■□□□□ 0.7
NEDD4P46934 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.43■□□□□ 0.7
NEDD4P46934 IGHV3-62-201ENST00000520057 340 ntBASIC19.43■□□□□ 0.7
NEDD4P46934 AC105233.2-201ENST00000523697 349 ntBASIC19.43■□□□□ 0.7
NEDD4P46934 AF228730.5-201ENST00000530288 346 ntBASIC19.43■□□□□ 0.7
NEDD4P46934 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NEDD4P46934 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.43■□□□□ 0.7
NEDD4P46934 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NEDD4P46934 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.43■□□□□ 0.7
NEDD4P46934 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.43■□□□□ 0.7
NEDD4P46934 AC009093.7-201ENST00000623853 1223 ntBASIC19.43■□□□□ 0.7
NEDD4P46934 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.43■□□□□ 0.7
NEDD4P46934 AC084121.4-201ENST00000641598 221 ntBASIC19.43■□□□□ 0.7
NEDD4P46934 AF228730.8-201ENST00000642140 221 ntBASIC19.43■□□□□ 0.7
NEDD4P46934 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEDD4P46934 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEDD4P46934 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.43■□□□□ 0.7
NEDD4P46934 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
NEDD4P46934 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.43■□□□□ 0.7
NEDD4P46934 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEDD4P46934 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NEDD4P46934 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
NEDD4P46934 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEDD4P46934 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEDD4P46934 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
NEDD4P46934 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEDD4P46934 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
NEDD4P46934 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEDD4P46934 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEDD4P46934 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.42■□□□□ 0.7
NEDD4P46934 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.42■□□□□ 0.7
NEDD4P46934 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEDD4P46934 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEDD4P46934 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NEDD4P46934 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.42■□□□□ 0.7
NEDD4P46934 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEDD4P46934 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEDD4P46934 AL139400.1-201ENST00000366220 510 ntBASIC19.42■□□□□ 0.7
NEDD4P46934 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.42■□□□□ 0.7
NEDD4P46934 KRT18P32-201ENST00000424695 1287 ntBASIC19.42■□□□□ 0.7
NEDD4P46934 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.42■□□□□ 0.7
NEDD4P46934 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms