Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NR4A2P43354 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NR4A2P43354 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NR4A2P43354 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NR4A2P43354 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
NR4A2P43354 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A2P43354 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A2P43354 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A2P43354 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A2P43354 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.14■□□□□ 0.01
NR4A2P43354 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A2P43354 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
NR4A2P43354 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A2P43354 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.14■□□□□ 0.01
NR4A2P43354 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A2P43354 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A2P43354 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A2P43354 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A2P43354 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A2P43354 AL590627.1-203ENST00000421194 1026 ntBASIC15.14■□□□□ 0.01
NR4A2P43354 FAM197Y8-203ENST00000450145 560 ntBASIC15.14■□□□□ 0.01
NR4A2P43354 AC068472.1-201ENST00000474589 881 ntBASIC15.14■□□□□ 0.01
NR4A2P43354 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.14■□□□□ 0.01
NR4A2P43354 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.14■□□□□ 0.01
NR4A2P43354 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.14■□□□□ 0.01
NR4A2P43354 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.14■□□□□ 0.01
NR4A2P43354 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.14■□□□□ 0.01
NR4A2P43354 AP001005.1-201ENST00000571755 1248 ntBASIC15.14■□□□□ 0.01
NR4A2P43354 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A2P43354 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
NR4A2P43354 AL773604.1-201ENST00000617417 272 ntBASIC15.14■□□□□ 0.01
NR4A2P43354 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A2P43354 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A2P43354 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A2P43354 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.14■□□□□ 0.01
NR4A2P43354 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.14■□□□□ 0.01
NR4A2P43354 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A2P43354 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.14■□□□□ 0.01
NR4A2P43354 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.14■□□□□ 0.01
NR4A2P43354 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.14■□□□□ 0.01
NR4A2P43354 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A2P43354 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A2P43354 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A2P43354 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
NR4A2P43354 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A2P43354 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NR4A2P43354 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
NR4A2P43354 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
NR4A2P43354 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NR4A2P43354 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
NR4A2P43354 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.13■□□□□ 0.01
NR4A2P43354 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A2P43354 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.13■□□□□ 0.01
NR4A2P43354 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NR4A2P43354 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A2P43354 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A2P43354 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A2P43354 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NR4A2P43354 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
NR4A2P43354 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A2P43354 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.13■□□□□ 0.01
NR4A2P43354 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.13■□□□□ 0.01
NR4A2P43354 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A2P43354 AC132008.2-207ENST00000454517 770 ntBASIC15.13■□□□□ 0.01
NR4A2P43354 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A2P43354 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.13■□□□□ 0.01
NR4A2P43354 AC009154.2-201ENST00000621177 724 ntBASIC15.13■□□□□ 0.01
NR4A2P43354 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NR4A2P43354 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NR4A2P43354 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A2P43354 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NR4A2P43354 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A2P43354 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A2P43354 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A2P43354 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NR4A2P43354 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A2P43354 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A2P43354 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A2P43354 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A2P43354 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A2P43354 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A2P43354 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A2P43354 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A2P43354 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A2P43354 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.12■□□□□ 0.01
NR4A2P43354 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A2P43354 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.12■□□□□ 0.01
NR4A2P43354 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A2P43354 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A2P43354 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.12■□□□□ 0.01
NR4A2P43354 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.12■□□□□ 0.01
NR4A2P43354 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.12■□□□□ 0.01
NR4A2P43354 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A2P43354 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A2P43354 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.12■□□□□ 0.01
NR4A2P43354 AF186996.4-201ENST00000467186 377 ntBASIC15.12■□□□□ 0.01
NR4A2P43354 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.12■□□□□ 0.01
NR4A2P43354 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.12■□□□□ 0.01
NR4A2P43354 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.12■□□□□ 0.01
NR4A2P43354 AC005336.2-201ENST00000593183 939 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms