Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MTHFRP42898 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.28■□□□□ 0.36
MTHFRP42898 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MTHFRP42898 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
MTHFRP42898 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MTHFRP42898 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
MTHFRP42898 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MTHFRP42898 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MTHFRP42898 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
MTHFRP42898 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MTHFRP42898 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MTHFRP42898 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MTHFRP42898 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MTHFRP42898 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MTHFRP42898 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MTHFRP42898 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
MTHFRP42898 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
MTHFRP42898 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MTHFRP42898 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.27■□□□□ 0.36
MTHFRP42898 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MTHFRP42898 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.27■□□□□ 0.36
MTHFRP42898 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MTHFRP42898 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MTHFRP42898 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.27■□□□□ 0.36
MTHFRP42898 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MTHFRP42898 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MTHFRP42898 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.27■□□□□ 0.36
MTHFRP42898 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.27■□□□□ 0.36
MTHFRP42898 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.27■□□□□ 0.36
MTHFRP42898 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.27■□□□□ 0.36
MTHFRP42898 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
MTHFRP42898 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.27■□□□□ 0.36
MTHFRP42898 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
MTHFRP42898 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.27■□□□□ 0.36
MTHFRP42898 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
MTHFRP42898 RNA5SP410-201ENST00000516285 106 ntBASIC17.27■□□□□ 0.36
MTHFRP42898 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.27■□□□□ 0.36
MTHFRP42898 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.27■□□□□ 0.36
MTHFRP42898 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.27■□□□□ 0.36
MTHFRP42898 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.27■□□□□ 0.36
MTHFRP42898 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.27■□□□□ 0.36
MTHFRP42898 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.27■□□□□ 0.36
MTHFRP42898 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MTHFRP42898 AL355312.1-201ENST00000407115 2176 ntBASIC17.27■□□□□ 0.36
MTHFRP42898 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
MTHFRP42898 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MTHFRP42898 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.27■□□□□ 0.35
MTHFRP42898 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MTHFRP42898 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
MTHFRP42898 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.27■□□□□ 0.35
MTHFRP42898 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MTHFRP42898 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MTHFRP42898 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MTHFRP42898 AC093525.9-201ENST00000624961 1746 ntBASIC17.27■□□□□ 0.35
MTHFRP42898 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MTHFRP42898 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
MTHFRP42898 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
MTHFRP42898 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MTHFRP42898 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MTHFRP42898 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MTHFRP42898 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.26■□□□□ 0.35
MTHFRP42898 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
MTHFRP42898 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MTHFRP42898 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.26■□□□□ 0.35
MTHFRP42898 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MTHFRP42898 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MTHFRP42898 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MTHFRP42898 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MTHFRP42898 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
MTHFRP42898 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.26■□□□□ 0.35
MTHFRP42898 AL080243.2-201ENST00000418783 582 ntBASIC17.26■□□□□ 0.35
MTHFRP42898 GNAQP1-201ENST00000444815 1067 ntBASIC17.26■□□□□ 0.35
MTHFRP42898 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
MTHFRP42898 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
MTHFRP42898 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
MTHFRP42898 AC106886.1-201ENST00000568660 600 ntBASIC17.26■□□□□ 0.35
MTHFRP42898 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.26■□□□□ 0.35
MTHFRP42898 MIR6805-201ENST00000615055 62 ntBASIC17.26■□□□□ 0.35
MTHFRP42898 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
MTHFRP42898 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MTHFRP42898 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
MTHFRP42898 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MTHFRP42898 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MTHFRP42898 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MTHFRP42898 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
MTHFRP42898 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MTHFRP42898 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
MTHFRP42898 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
MTHFRP42898 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MTHFRP42898 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
MTHFRP42898 AC073439.1-201ENST00000624121 1774 ntBASIC17.25■□□□□ 0.35
MTHFRP42898 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MTHFRP42898 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.25■□□□□ 0.35
MTHFRP42898 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MTHFRP42898 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.25■□□□□ 0.35
MTHFRP42898 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MTHFRP42898 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.25■□□□□ 0.35
MTHFRP42898 AC080080.1-201ENST00000625121 2420 ntBASIC17.25■□□□□ 0.35
MTHFRP42898 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MTHFRP42898 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms