Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 KRT18P2-201ENST00000447938 1258 ntBASIC13.55□□□□□ -0.24
CEACAM3P40198 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM3P40198 POLD2P1-201ENST00000511220 997 ntBASIC13.55□□□□□ -0.24
CEACAM3P40198 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.55□□□□□ -0.24
CEACAM3P40198 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.55□□□□□ -0.24
CEACAM3P40198 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.55□□□□□ -0.24
CEACAM3P40198 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.55□□□□□ -0.24
CEACAM3P40198 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.55□□□□□ -0.24
CEACAM3P40198 U1.21-201ENST00000580816 167 ntBASIC13.55□□□□□ -0.24
CEACAM3P40198 AL161645.1-201ENST00000622716 1255 ntBASIC13.55□□□□□ -0.24
CEACAM3P40198 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.55□□□□□ -0.24
CEACAM3P40198 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CEACAM3P40198 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
CEACAM3P40198 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM3P40198 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CEACAM3P40198 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM3P40198 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
CEACAM3P40198 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.55□□□□□ -0.24
CEACAM3P40198 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM3P40198 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM3P40198 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM3P40198 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CEACAM3P40198 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CEACAM3P40198 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM3P40198 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.55□□□□□ -0.24
CEACAM3P40198 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
CEACAM3P40198 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM3P40198 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
CEACAM3P40198 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.54□□□□□ -0.24
CEACAM3P40198 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM3P40198 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM3P40198 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM3P40198 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM3P40198 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM3P40198 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM3P40198 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM3P40198 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM3P40198 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM3P40198 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM3P40198 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
CEACAM3P40198 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.54□□□□□ -0.24
CEACAM3P40198 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.54□□□□□ -0.24
CEACAM3P40198 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
CEACAM3P40198 AC140658.5-201ENST00000438532 169 ntBASIC13.54□□□□□ -0.24
CEACAM3P40198 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.54□□□□□ -0.24
CEACAM3P40198 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.54□□□□□ -0.24
CEACAM3P40198 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.54□□□□□ -0.24
CEACAM3P40198 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.54□□□□□ -0.24
CEACAM3P40198 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.54□□□□□ -0.24
CEACAM3P40198 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.54□□□□□ -0.24
CEACAM3P40198 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM3P40198 MTDHP5-201ENST00000598980 586 ntBASIC13.54□□□□□ -0.24
CEACAM3P40198 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM3P40198 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM3P40198 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM3P40198 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.54□□□□□ -0.24
CEACAM3P40198 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM3P40198 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.54□□□□□ -0.24
CEACAM3P40198 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM3P40198 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CEACAM3P40198 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM3P40198 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM3P40198 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CEACAM3P40198 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CEACAM3P40198 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM3P40198 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM3P40198 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM3P40198 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM3P40198 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM3P40198 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM3P40198 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM3P40198 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM3P40198 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM3P40198 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CEACAM3P40198 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.53□□□□□ -0.24
CEACAM3P40198 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CEACAM3P40198 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.53□□□□□ -0.24
CEACAM3P40198 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 AC022211.2-201ENST00000585075 2527 ntBASIC13.53□□□□□ -0.24
CEACAM3P40198 AC106886.4-201ENST00000623557 2502 ntBASIC13.53□□□□□ -0.24
CEACAM3P40198 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CEACAM3P40198 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
CEACAM3P40198 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CEACAM3P40198 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms