Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL15A1P39059 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL15A1P39059 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.77■□□□□ 0.92
COL15A1P39059 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.77■□□□□ 0.91
COL15A1P39059 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
COL15A1P39059 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
COL15A1P39059 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.76■□□□□ 0.91
COL15A1P39059 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL15A1P39059 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.76■□□□□ 0.91
COL15A1P39059 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL15A1P39059 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
COL15A1P39059 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL15A1P39059 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC20.76■□□□□ 0.91
COL15A1P39059 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC20.76■□□□□ 0.91
COL15A1P39059 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC20.76■□□□□ 0.91
COL15A1P39059 RN7SL837P-201ENST00000463010 287 ntBASIC20.76■□□□□ 0.91
COL15A1P39059 AC011495.1-201ENST00000498085 584 ntBASIC20.76■□□□□ 0.91
COL15A1P39059 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC20.76■□□□□ 0.91
COL15A1P39059 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC20.76■□□□□ 0.91
COL15A1P39059 AC004461.2-201ENST00000629517 803 ntBASIC20.76■□□□□ 0.91
COL15A1P39059 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
COL15A1P39059 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.76■□□□□ 0.91
COL15A1P39059 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.76■□□□□ 0.91
COL15A1P39059 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
COL15A1P39059 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
COL15A1P39059 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL15A1P39059 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.76■□□□□ 0.91
COL15A1P39059 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.76■□□□□ 0.91
COL15A1P39059 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL15A1P39059 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL15A1P39059 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
COL15A1P39059 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL15A1P39059 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL15A1P39059 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL15A1P39059 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL15A1P39059 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
COL15A1P39059 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.76■□□□□ 0.91
COL15A1P39059 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL15A1P39059 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL15A1P39059 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL15A1P39059 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.75■□□□□ 0.91
COL15A1P39059 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.75■□□□□ 0.91
COL15A1P39059 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC20.75■□□□□ 0.91
COL15A1P39059 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL15A1P39059 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL15A1P39059 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL15A1P39059 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC20.75■□□□□ 0.91
COL15A1P39059 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL15A1P39059 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC20.75■□□□□ 0.91
COL15A1P39059 AC112492.5-201ENST00000421897 457 ntBASIC20.75■□□□□ 0.91
COL15A1P39059 AL589987.1-201ENST00000453380 819 ntBASIC20.75■□□□□ 0.91
COL15A1P39059 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC20.75■□□□□ 0.91
COL15A1P39059 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC20.75■□□□□ 0.91
COL15A1P39059 AC023310.3-201ENST00000557027 670 ntBASIC20.75■□□□□ 0.91
COL15A1P39059 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC20.75■□□□□ 0.91
COL15A1P39059 AC100756.1-201ENST00000562736 682 ntBASIC20.75■□□□□ 0.91
COL15A1P39059 AC138749.3-201ENST00000567691 622 ntBASIC20.75■□□□□ 0.91
COL15A1P39059 AC116165.1-201ENST00000611806 668 ntBASIC20.75■□□□□ 0.91
COL15A1P39059 5S_rRNA.22-201ENST00000614916 106 ntBASIC20.75■□□□□ 0.91
COL15A1P39059 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.75■□□□□ 0.91
COL15A1P39059 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC20.75■□□□□ 0.91
COL15A1P39059 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL15A1P39059 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL15A1P39059 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.75■□□□□ 0.91
COL15A1P39059 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL15A1P39059 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC20.75■□□□□ 0.91
COL15A1P39059 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC20.75■□□□□ 0.91
COL15A1P39059 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC20.75■□□□□ 0.91
COL15A1P39059 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL15A1P39059 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL15A1P39059 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL15A1P39059 AC006538.1-201ENST00000567905 1585 ntBASIC20.75■□□□□ 0.91
COL15A1P39059 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
COL15A1P39059 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL15A1P39059 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.75■□□□□ 0.91
COL15A1P39059 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL15A1P39059 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
COL15A1P39059 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL15A1P39059 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
COL15A1P39059 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL15A1P39059 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.74■□□□□ 0.91
COL15A1P39059 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.74■□□□□ 0.91
COL15A1P39059 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC20.74■□□□□ 0.91
COL15A1P39059 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
COL15A1P39059 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
COL15A1P39059 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL15A1P39059 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL15A1P39059 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC20.74■□□□□ 0.91
COL15A1P39059 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
COL15A1P39059 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL15A1P39059 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC20.74■□□□□ 0.91
COL15A1P39059 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC20.74■□□□□ 0.91
COL15A1P39059 TPRX2P-201ENST00000535362 881 ntBASIC20.74■□□□□ 0.91
COL15A1P39059 AC106886.1-201ENST00000568660 600 ntBASIC20.74■□□□□ 0.91
COL15A1P39059 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC20.74■□□□□ 0.91
COL15A1P39059 AC026979.3-201ENST00000607315 403 ntBASIC20.74■□□□□ 0.91
COL15A1P39059 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.74■□□□□ 0.91
COL15A1P39059 AL109936.8-201ENST00000641772 604 ntBASIC20.74■□□□□ 0.91
COL15A1P39059 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
COL15A1P39059 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms