Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
CHKAP35790 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHKAP35790 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHKAP35790 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHKAP35790 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.5■□□□□ 0.39
CHKAP35790 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.5■□□□□ 0.39
CHKAP35790 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.5■□□□□ 0.39
CHKAP35790 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CHKAP35790 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHKAP35790 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CHKAP35790 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHKAP35790 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.5■□□□□ 0.39
CHKAP35790 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
CHKAP35790 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHKAP35790 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHKAP35790 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.5■□□□□ 0.39
CHKAP35790 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHKAP35790 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHKAP35790 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CHKAP35790 AC254562.1-201ENST00000417586 456 ntBASIC17.5■□□□□ 0.39
CHKAP35790 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHKAP35790 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.5■□□□□ 0.39
CHKAP35790 DNAJB3-202ENST00000449667 1266 ntBASIC17.5■□□□□ 0.39
CHKAP35790 AC112191.1-201ENST00000523689 701 ntBASIC17.5■□□□□ 0.39
CHKAP35790 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.5■□□□□ 0.39
CHKAP35790 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHKAP35790 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.5■□□□□ 0.39
CHKAP35790 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.5■□□□□ 0.39
CHKAP35790 AC091812.2-201ENST00000619081 385 ntBASIC17.5■□□□□ 0.39
CHKAP35790 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHKAP35790 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHKAP35790 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.5■□□□□ 0.39
CHKAP35790 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHKAP35790 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.5■□□□□ 0.39
CHKAP35790 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
CHKAP35790 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHKAP35790 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHKAP35790 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.5■□□□□ 0.39
CHKAP35790 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
CHKAP35790 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHKAP35790 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CHKAP35790 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHKAP35790 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CHKAP35790 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHKAP35790 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHKAP35790 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHKAP35790 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CHKAP35790 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHKAP35790 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.5■□□□□ 0.39
CHKAP35790 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHKAP35790 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHKAP35790 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHKAP35790 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHKAP35790 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHKAP35790 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CHKAP35790 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.49■□□□□ 0.39
CHKAP35790 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHKAP35790 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHKAP35790 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.49■□□□□ 0.39
CHKAP35790 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CHKAP35790 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CHKAP35790 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.49■□□□□ 0.39
CHKAP35790 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.49■□□□□ 0.39
CHKAP35790 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.49■□□□□ 0.39
CHKAP35790 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.49■□□□□ 0.39
CHKAP35790 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.49■□□□□ 0.39
CHKAP35790 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHKAP35790 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.49■□□□□ 0.39
CHKAP35790 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.49■□□□□ 0.39
CHKAP35790 SNHG9-202ENST00000564014 471 ntBASIC17.49■□□□□ 0.39
CHKAP35790 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.49■□□□□ 0.39
CHKAP35790 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.49■□□□□ 0.39
CHKAP35790 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHKAP35790 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
CHKAP35790 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHKAP35790 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHKAP35790 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHKAP35790 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHKAP35790 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHKAP35790 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.49■□□□□ 0.39
CHKAP35790 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CHKAP35790 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHKAP35790 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHKAP35790 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHKAP35790 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.48■□□□□ 0.39
CHKAP35790 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHKAP35790 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.48■□□□□ 0.39
CHKAP35790 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHKAP35790 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.48■□□□□ 0.39
CHKAP35790 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHKAP35790 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.48■□□□□ 0.39
CHKAP35790 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.48■□□□□ 0.39
CHKAP35790 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHKAP35790 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHKAP35790 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHKAP35790 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHKAP35790 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHKAP35790 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHKAP35790 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHKAP35790 AC002056.1-201ENST00000395613 760 ntBASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms