Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.51■□□□□ 0.39
CHRNA3P32297 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.51■□□□□ 0.39
CHRNA3P32297 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.51■□□□□ 0.39
CHRNA3P32297 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA3P32297 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA3P32297 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA3P32297 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA3P32297 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA3P32297 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA3P32297 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
CHRNA3P32297 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA3P32297 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.51■□□□□ 0.39
CHRNA3P32297 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CHRNA3P32297 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA3P32297 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.5■□□□□ 0.39
CHRNA3P32297 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA3P32297 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA3P32297 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA3P32297 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA3P32297 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA3P32297 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CHRNA3P32297 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA3P32297 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA3P32297 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.5■□□□□ 0.39
CHRNA3P32297 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA3P32297 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA3P32297 MED15P5-201ENST00000423150 992 ntBASIC17.5■□□□□ 0.39
CHRNA3P32297 RPS15P9-201ENST00000494093 319 ntBASIC17.5■□□□□ 0.39
CHRNA3P32297 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.5■□□□□ 0.39
CHRNA3P32297 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CHRNA3P32297 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.5■□□□□ 0.39
CHRNA3P32297 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
CHRNA3P32297 AC140113.2-201ENST00000604370 208 ntBASIC17.5■□□□□ 0.39
CHRNA3P32297 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA3P32297 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA3P32297 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA3P32297 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA3P32297 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA3P32297 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA3P32297 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.5■□□□□ 0.39
CHRNA3P32297 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA3P32297 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.5■□□□□ 0.39
CHRNA3P32297 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA3P32297 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA3P32297 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA3P32297 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CHRNA3P32297 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CHRNA3P32297 PMS2P7-201ENST00000506558 1336 ntBASIC17.49■□□□□ 0.39
CHRNA3P32297 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA3P32297 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
CHRNA3P32297 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.49■□□□□ 0.39
CHRNA3P32297 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA3P32297 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA3P32297 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA3P32297 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CHRNA3P32297 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
CHRNA3P32297 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA3P32297 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA3P32297 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.49■□□□□ 0.39
CHRNA3P32297 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.49■□□□□ 0.39
CHRNA3P32297 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.49■□□□□ 0.39
CHRNA3P32297 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CHRNA3P32297 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.49■□□□□ 0.39
CHRNA3P32297 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA3P32297 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA3P32297 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA3P32297 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA3P32297 AL591424.1-201ENST00000442569 1213 ntBASIC17.49■□□□□ 0.39
CHRNA3P32297 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.49■□□□□ 0.39
CHRNA3P32297 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.49■□□□□ 0.39
CHRNA3P32297 FAM197Y3-203ENST00000618346 717 ntBASIC17.49■□□□□ 0.39
CHRNA3P32297 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA3P32297 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA3P32297 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CHRNA3P32297 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.49■□□□□ 0.39
CHRNA3P32297 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA3P32297 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.49■□□□□ 0.39
CHRNA3P32297 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.49■□□□□ 0.39
CHRNA3P32297 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA3P32297 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA3P32297 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA3P32297 GGT3P-204ENST00000453783 1664 ntBASIC17.48■□□□□ 0.39
CHRNA3P32297 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.48■□□□□ 0.39
CHRNA3P32297 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA3P32297 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA3P32297 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA3P32297 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA3P32297 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.48■□□□□ 0.39
CHRNA3P32297 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CHRNA3P32297 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.48■□□□□ 0.39
CHRNA3P32297 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA3P32297 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.48■□□□□ 0.39
CHRNA3P32297 AL596087.1-201ENST00000400979 1969 ntBASIC17.48■□□□□ 0.39
CHRNA3P32297 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA3P32297 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA3P32297 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA3P32297 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.48■□□□□ 0.39
CHRNA3P32297 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA3P32297 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.48■□□□□ 0.39
CHRNA3P32297 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms