Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC20.3■□□□□ 0.84
TM4SF1P30408 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC20.3■□□□□ 0.84
TM4SF1P30408 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TM4SF1P30408 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TM4SF1P30408 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.3■□□□□ 0.84
TM4SF1P30408 KRT8P44-201ENST00000441609 1350 ntBASIC20.3■□□□□ 0.84
TM4SF1P30408 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TM4SF1P30408 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TM4SF1P30408 GGT4P-201ENST00000623672 1708 ntBASIC20.3■□□□□ 0.84
TM4SF1P30408 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TM4SF1P30408 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TM4SF1P30408 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC20.3■□□□□ 0.84
TM4SF1P30408 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TM4SF1P30408 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TM4SF1P30408 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TM4SF1P30408 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TM4SF1P30408 CYP4F24P-201ENST00000586049 1580 ntBASIC20.29■□□□□ 0.84
TM4SF1P30408 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TM4SF1P30408 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC20.29■□□□□ 0.84
TM4SF1P30408 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TM4SF1P30408 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC20.29■□□□□ 0.84
TM4SF1P30408 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TM4SF1P30408 AC007613.1-201ENST00000572811 2597 ntBASIC20.29■□□□□ 0.84
TM4SF1P30408 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TM4SF1P30408 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TM4SF1P30408 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TM4SF1P30408 LBX2-201ENST00000341396 886 ntTSL 3 BASIC20.29■□□□□ 0.84
TM4SF1P30408 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TM4SF1P30408 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TM4SF1P30408 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC20.29■□□□□ 0.84
TM4SF1P30408 CD74-212ENST00000524315 584 ntTSL 5 BASIC20.29■□□□□ 0.84
TM4SF1P30408 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TM4SF1P30408 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC20.29■□□□□ 0.84
TM4SF1P30408 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC20.29■□□□□ 0.84
TM4SF1P30408 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TM4SF1P30408 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC20.29■□□□□ 0.84
TM4SF1P30408 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TM4SF1P30408 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC20.29■□□□□ 0.84
TM4SF1P30408 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TM4SF1P30408 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.29■□□□□ 0.84
TM4SF1P30408 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TM4SF1P30408 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC20.29■□□□□ 0.84
TM4SF1P30408 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TM4SF1P30408 TUBB1P2-201ENST00000422712 1306 ntBASIC20.28■□□□□ 0.84
TM4SF1P30408 TUBB1P1-201ENST00000503144 1300 ntBASIC20.28■□□□□ 0.84
TM4SF1P30408 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TM4SF1P30408 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TM4SF1P30408 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC20.28■□□□□ 0.84
TM4SF1P30408 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TM4SF1P30408 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TM4SF1P30408 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TM4SF1P30408 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TM4SF1P30408 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.28■□□□□ 0.84
TM4SF1P30408 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TM4SF1P30408 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC20.28■□□□□ 0.84
TM4SF1P30408 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TM4SF1P30408 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TM4SF1P30408 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TM4SF1P30408 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC20.28■□□□□ 0.84
TM4SF1P30408 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TM4SF1P30408 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC20.28■□□□□ 0.84
TM4SF1P30408 KLF2P4-201ENST00000451959 1225 ntBASIC20.28■□□□□ 0.84
TM4SF1P30408 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC20.28■□□□□ 0.84
TM4SF1P30408 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC20.28■□□□□ 0.84
TM4SF1P30408 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TM4SF1P30408 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC20.28■□□□□ 0.84
TM4SF1P30408 PAM16-215ENST00000577031 548 ntTSL 4 BASIC20.28■□□□□ 0.84
TM4SF1P30408 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC20.28■□□□□ 0.84
TM4SF1P30408 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC20.28■□□□□ 0.84
TM4SF1P30408 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TM4SF1P30408 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TM4SF1P30408 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TM4SF1P30408 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TM4SF1P30408 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TM4SF1P30408 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
TM4SF1P30408 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TM4SF1P30408 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TM4SF1P30408 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.27■□□□□ 0.84
TM4SF1P30408 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
TM4SF1P30408 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TM4SF1P30408 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TM4SF1P30408 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TM4SF1P30408 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.27■□□□□ 0.84
TM4SF1P30408 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TM4SF1P30408 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.27■□□□□ 0.84
TM4SF1P30408 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TM4SF1P30408 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TM4SF1P30408 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TM4SF1P30408 CSF2RBP1-201ENST00000447905 391 ntBASIC20.27■□□□□ 0.84
TM4SF1P30408 RNA5SP412-201ENST00000516234 123 ntBASIC20.27■□□□□ 0.84
TM4SF1P30408 SUOX-214ENST00000551841 906 ntTSL 3 BASIC20.27■□□□□ 0.84
TM4SF1P30408 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TM4SF1P30408 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
TM4SF1P30408 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.27■□□□□ 0.84
TM4SF1P30408 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.27■□□□□ 0.84
TM4SF1P30408 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.27■□□□□ 0.84
TM4SF1P30408 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TM4SF1P30408 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TM4SF1P30408 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TM4SF1P30408 KRT8P22-201ENST00000562317 1415 ntBASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms