Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD40LGP29965 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD40LGP29965 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD40LGP29965 AC020658.6-201ENST00000623564 1870 ntBASIC14.74□□□□□ -0.05
CD40LGP29965 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CD40LGP29965 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD40LGP29965 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD40LGP29965 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD40LGP29965 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.74□□□□□ -0.05
CD40LGP29965 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.74□□□□□ -0.05
CD40LGP29965 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD40LGP29965 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD40LGP29965 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.74□□□□□ -0.05
CD40LGP29965 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC14.74□□□□□ -0.05
CD40LGP29965 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.74□□□□□ -0.05
CD40LGP29965 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD40LGP29965 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.74□□□□□ -0.05
CD40LGP29965 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.74□□□□□ -0.05
CD40LGP29965 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
CD40LGP29965 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.74□□□□□ -0.05
CD40LGP29965 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.74□□□□□ -0.05
CD40LGP29965 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.74□□□□□ -0.05
CD40LGP29965 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD40LGP29965 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.74□□□□□ -0.05
CD40LGP29965 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD40LGP29965 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD40LGP29965 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD40LGP29965 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD40LGP29965 AC097637.2-201ENST00000624096 1997 ntBASIC14.74□□□□□ -0.05
CD40LGP29965 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.74□□□□□ -0.05
CD40LGP29965 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD40LGP29965 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.74□□□□□ -0.05
CD40LGP29965 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CD40LGP29965 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.74□□□□□ -0.05
CD40LGP29965 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD40LGP29965 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.74□□□□□ -0.05
CD40LGP29965 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CD40LGP29965 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD40LGP29965 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.74□□□□□ -0.05
CD40LGP29965 AL391807.1-203ENST00000604392 2365 ntBASIC14.74□□□□□ -0.05
CD40LGP29965 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.74□□□□□ -0.05
CD40LGP29965 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
CD40LGP29965 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.74□□□□□ -0.05
CD40LGP29965 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD40LGP29965 CICP23-201ENST00000605013 2741 ntBASIC14.73□□□□□ -0.05
CD40LGP29965 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CD40LGP29965 AC005840.4-201ENST00000541242 2494 ntBASIC14.73□□□□□ -0.05
CD40LGP29965 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD40LGP29965 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.73□□□□□ -0.05
CD40LGP29965 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.73□□□□□ -0.05
CD40LGP29965 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.73□□□□□ -0.05
CD40LGP29965 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.73□□□□□ -0.05
CD40LGP29965 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD40LGP29965 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD40LGP29965 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD40LGP29965 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD40LGP29965 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CD40LGP29965 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD40LGP29965 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD40LGP29965 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD40LGP29965 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.73□□□□□ -0.05
CD40LGP29965 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CD40LGP29965 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CD40LGP29965 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD40LGP29965 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
CD40LGP29965 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.73□□□□□ -0.05
CD40LGP29965 ATP5G1P1-201ENST00000448724 379 ntBASIC14.73□□□□□ -0.05
CD40LGP29965 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.73□□□□□ -0.05
CD40LGP29965 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CD40LGP29965 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
CD40LGP29965 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.73□□□□□ -0.05
CD40LGP29965 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.73□□□□□ -0.05
CD40LGP29965 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CD40LGP29965 AC133561.5-201ENST00000635547 218 ntBASIC14.73□□□□□ -0.05
CD40LGP29965 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CD40LGP29965 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CD40LGP29965 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD40LGP29965 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.73□□□□□ -0.05
CD40LGP29965 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD40LGP29965 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD40LGP29965 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CD40LGP29965 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.73□□□□□ -0.05
CD40LGP29965 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CD40LGP29965 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD40LGP29965 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.73□□□□□ -0.05
CD40LGP29965 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD40LGP29965 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.73□□□□□ -0.05
CD40LGP29965 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CD40LGP29965 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD40LGP29965 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.73□□□□□ -0.05
CD40LGP29965 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD40LGP29965 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD40LGP29965 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD40LGP29965 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.73□□□□□ -0.05
CD40LGP29965 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.73□□□□□ -0.05
CD40LGP29965 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.72□□□□□ -0.05
CD40LGP29965 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.72□□□□□ -0.05
CD40LGP29965 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.72□□□□□ -0.05
CD40LGP29965 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.72□□□□□ -0.05
CD40LGP29965 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 152.7 ms