Protein–RNA interactions for Protein: P16144

ITGB4, Integrin beta-4, humanhuman

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4P16144 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC20.82■□□□□ 0.92
ITGB4P16144 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ITGB4P16144 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ITGB4P16144 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ITGB4P16144 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.82■□□□□ 0.92
ITGB4P16144 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ITGB4P16144 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ITGB4P16144 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ITGB4P16144 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ITGB4P16144 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC20.81■□□□□ 0.92
ITGB4P16144 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC20.81■□□□□ 0.92
ITGB4P16144 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ITGB4P16144 MIR1908-201ENST00000410394 80 ntBASIC20.81■□□□□ 0.92
ITGB4P16144 USB1-202ENST00000423271 1217 ntTSL 2 BASIC20.81■□□□□ 0.92
ITGB4P16144 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC20.81■□□□□ 0.92
ITGB4P16144 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ITGB4P16144 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC20.81■□□□□ 0.92
ITGB4P16144 AL049840.4-201ENST00000602422 811 ntBASIC20.81■□□□□ 0.92
ITGB4P16144 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC20.81■□□□□ 0.92
ITGB4P16144 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ITGB4P16144 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ITGB4P16144 ABBA01031660.1-201ENST00000635219 756 ntBASIC20.81■□□□□ 0.92
ITGB4P16144 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ITGB4P16144 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.81■□□□□ 0.92
ITGB4P16144 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ITGB4P16144 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.81■□□□□ 0.92
ITGB4P16144 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ITGB4P16144 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC20.81■□□□□ 0.92
ITGB4P16144 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
ITGB4P16144 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
ITGB4P16144 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ITGB4P16144 AC006538.1-201ENST00000567905 1585 ntBASIC20.81■□□□□ 0.92
ITGB4P16144 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ITGB4P16144 INTS4P2-202ENST00000614726 2019 ntBASIC20.81■□□□□ 0.92
ITGB4P16144 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ITGB4P16144 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ITGB4P16144 AC104596.2-201ENST00000512793 793 ntBASIC20.81■□□□□ 0.92
ITGB4P16144 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC20.81■□□□□ 0.92
ITGB4P16144 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC20.81■□□□□ 0.92
ITGB4P16144 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC20.81■□□□□ 0.92
ITGB4P16144 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ITGB4P16144 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ITGB4P16144 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC20.81■□□□□ 0.92
ITGB4P16144 AC005622.1-201ENST00000636801 1703 ntBASIC20.8■□□□□ 0.92
ITGB4P16144 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ITGB4P16144 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
ITGB4P16144 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ITGB4P16144 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ITGB4P16144 KRT8P37-201ENST00000451609 1420 ntBASIC20.8■□□□□ 0.92
ITGB4P16144 TP73-213ENST00000604479 1623 ntTSL 5 BASIC20.8■□□□□ 0.92
ITGB4P16144 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC20.8■□□□□ 0.92
ITGB4P16144 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ITGB4P16144 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ITGB4P16144 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC20.8■□□□□ 0.92
ITGB4P16144 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ITGB4P16144 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ITGB4P16144 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.8■□□□□ 0.92
ITGB4P16144 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ITGB4P16144 LBX2-201ENST00000341396 886 ntTSL 3 BASIC20.8■□□□□ 0.92
ITGB4P16144 AC005229.1-201ENST00000392885 409 ntBASIC20.8■□□□□ 0.92
ITGB4P16144 TOMM22P5-201ENST00000416399 439 ntBASIC20.8■□□□□ 0.92
ITGB4P16144 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ITGB4P16144 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC20.8■□□□□ 0.92
ITGB4P16144 FAM8A2P-201ENST00000528813 1142 ntBASIC20.8■□□□□ 0.92
ITGB4P16144 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ITGB4P16144 CU634019.7-201ENST00000624153 1185 ntBASIC20.8■□□□□ 0.92
ITGB4P16144 FP236241.2-201ENST00000624906 1185 ntBASIC20.8■□□□□ 0.92
ITGB4P16144 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC20.8■□□□□ 0.92
ITGB4P16144 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ITGB4P16144 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ITGB4P16144 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ITGB4P16144 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ITGB4P16144 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ITGB4P16144 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ITGB4P16144 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC20.79■□□□□ 0.92
ITGB4P16144 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ITGB4P16144 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ITGB4P16144 MPV17-206ENST00000402722 827 ntTSL 3 BASIC20.79■□□□□ 0.92
ITGB4P16144 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ITGB4P16144 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
ITGB4P16144 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ITGB4P16144 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC20.79■□□□□ 0.92
ITGB4P16144 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.79■□□□□ 0.92
ITGB4P16144 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ITGB4P16144 AC005915.1-201ENST00000624912 2018 ntBASIC20.79■□□□□ 0.92
ITGB4P16144 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC20.79■□□□□ 0.92
ITGB4P16144 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ITGB4P16144 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ITGB4P16144 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ITGB4P16144 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
ITGB4P16144 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ITGB4P16144 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ITGB4P16144 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ITGB4P16144 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC20.79■□□□□ 0.92
ITGB4P16144 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ITGB4P16144 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ITGB4P16144 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ITGB4P16144 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC20.78■□□□□ 0.92
ITGB4P16144 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC20.78■□□□□ 0.92
ITGB4P16144 RPL28-203ENST00000428193 573 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms