Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT3P12035 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT3P12035 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT3P12035 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT3P12035 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT3P12035 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT3P12035 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT3P12035 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
KRT3P12035 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT3P12035 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT3P12035 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.46■□□□□ 0.39
KRT3P12035 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT3P12035 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT3P12035 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT3P12035 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT3P12035 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KRT3P12035 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
KRT3P12035 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT3P12035 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT3P12035 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.46■□□□□ 0.39
KRT3P12035 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KRT3P12035 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT3P12035 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT3P12035 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT3P12035 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT3P12035 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT3P12035 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT3P12035 PMS2P4-201ENST00000412466 1052 ntBASIC17.46■□□□□ 0.39
KRT3P12035 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.46■□□□□ 0.39
KRT3P12035 KRT18P2-201ENST00000447938 1258 ntBASIC17.46■□□□□ 0.39
KRT3P12035 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.46■□□□□ 0.39
KRT3P12035 SLC25A1P1-201ENST00000528351 927 ntBASIC17.46■□□□□ 0.39
KRT3P12035 MIR3909-201ENST00000579518 119 ntBASIC17.46■□□□□ 0.39
KRT3P12035 AC021097.1-201ENST00000607902 574 ntBASIC17.46■□□□□ 0.39
KRT3P12035 AC020765.3-201ENST00000613051 740 ntBASIC17.46■□□□□ 0.39
KRT3P12035 AC004877.2-201ENST00000623941 599 ntBASIC17.46■□□□□ 0.39
KRT3P12035 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KRT3P12035 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.46■□□□□ 0.39
KRT3P12035 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT3P12035 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
KRT3P12035 LINC01144-201ENST00000626198 1710 ntBASIC17.46■□□□□ 0.39
KRT3P12035 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT3P12035 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KRT3P12035 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.46■□□□□ 0.39
KRT3P12035 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.46■□□□□ 0.39
KRT3P12035 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT3P12035 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT3P12035 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
KRT3P12035 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.46■□□□□ 0.38
KRT3P12035 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.45■□□□□ 0.38
KRT3P12035 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.45■□□□□ 0.38
KRT3P12035 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT3P12035 TNRC18P3-201ENST00000441896 2691 ntBASIC17.45■□□□□ 0.38
KRT3P12035 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT3P12035 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
KRT3P12035 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT3P12035 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT3P12035 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT3P12035 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT3P12035 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.45■□□□□ 0.38
KRT3P12035 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT3P12035 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT3P12035 DOC2GP-204ENST00000639052 2548 ntBASIC17.45■□□□□ 0.38
KRT3P12035 CYP2T1P-202ENST00000641596 2535 ntBASIC17.45■□□□□ 0.38
KRT3P12035 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
KRT3P12035 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
KRT3P12035 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
KRT3P12035 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
KRT3P12035 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT3P12035 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT3P12035 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT3P12035 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT3P12035 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
KRT3P12035 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.45■□□□□ 0.38
KRT3P12035 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.45■□□□□ 0.38
KRT3P12035 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT3P12035 AC106730.1-201ENST00000566722 1090 ntBASIC17.45■□□□□ 0.38
KRT3P12035 AC018845.2-201ENST00000568326 409 ntBASIC17.45■□□□□ 0.38
KRT3P12035 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
KRT3P12035 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT3P12035 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.45■□□□□ 0.38
KRT3P12035 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT3P12035 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT3P12035 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT3P12035 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
KRT3P12035 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT3P12035 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT3P12035 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT3P12035 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT3P12035 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.45■□□□□ 0.38
KRT3P12035 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT3P12035 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
KRT3P12035 AC025580.3-201ENST00000617932 1424 ntBASIC17.45■□□□□ 0.38
KRT3P12035 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
KRT3P12035 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
KRT3P12035 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT3P12035 BCAR1-209ENST00000546196 1340 ntBASIC17.45■□□□□ 0.38
KRT3P12035 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT3P12035 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT3P12035 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms