Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SP9P0CG40 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SP9P0CG40 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SP9P0CG40 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SP9P0CG40 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SP9P0CG40 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SP9P0CG40 MIR326-201ENST00000362220 95 ntBASIC16.07■□□□□ 0.16
SP9P0CG40 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SP9P0CG40 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SP9P0CG40 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.07■□□□□ 0.16
SP9P0CG40 FAM86LP-201ENST00000478302 853 ntBASIC16.07■□□□□ 0.16
SP9P0CG40 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.07■□□□□ 0.16
SP9P0CG40 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SP9P0CG40 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SP9P0CG40 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.07■□□□□ 0.16
SP9P0CG40 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.07■□□□□ 0.16
SP9P0CG40 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SP9P0CG40 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.07■□□□□ 0.16
SP9P0CG40 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.07■□□□□ 0.16
SP9P0CG40 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.07■□□□□ 0.16
SP9P0CG40 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.07■□□□□ 0.16
SP9P0CG40 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.07■□□□□ 0.16
SP9P0CG40 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.07■□□□□ 0.16
SP9P0CG40 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SP9P0CG40 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.07■□□□□ 0.16
SP9P0CG40 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.07■□□□□ 0.16
SP9P0CG40 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.07■□□□□ 0.16
SP9P0CG40 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.07■□□□□ 0.16
SP9P0CG40 RHOXF1P1-202ENST00000635473 501 ntBASIC16.07■□□□□ 0.16
SP9P0CG40 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.07■□□□□ 0.16
SP9P0CG40 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.07■□□□□ 0.16
SP9P0CG40 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SP9P0CG40 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SP9P0CG40 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.07■□□□□ 0.16
SP9P0CG40 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.07■□□□□ 0.16
SP9P0CG40 ABALON-201ENST00000629058 1903 ntBASIC16.07■□□□□ 0.16
SP9P0CG40 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SP9P0CG40 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.07■□□□□ 0.16
SP9P0CG40 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SP9P0CG40 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.07■□□□□ 0.16
SP9P0CG40 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SP9P0CG40 AC093503.3-201ENST00000624917 2352 ntBASIC16.07■□□□□ 0.16
SP9P0CG40 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.07■□□□□ 0.16
SP9P0CG40 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SP9P0CG40 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SP9P0CG40 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
SP9P0CG40 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.06■□□□□ 0.16
SP9P0CG40 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SP9P0CG40 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SP9P0CG40 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SP9P0CG40 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
SP9P0CG40 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.06■□□□□ 0.16
SP9P0CG40 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SP9P0CG40 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.06■□□□□ 0.16
SP9P0CG40 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SP9P0CG40 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SP9P0CG40 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SP9P0CG40 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.06■□□□□ 0.16
SP9P0CG40 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SP9P0CG40 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SP9P0CG40 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SP9P0CG40 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SP9P0CG40 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.06■□□□□ 0.16
SP9P0CG40 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.06■□□□□ 0.16
SP9P0CG40 FAM86HP-204ENST00000513466 959 ntBASIC16.06■□□□□ 0.16
SP9P0CG40 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.06■□□□□ 0.16
SP9P0CG40 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.06■□□□□ 0.16
SP9P0CG40 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.06■□□□□ 0.16
SP9P0CG40 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SP9P0CG40 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.06■□□□□ 0.16
SP9P0CG40 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.06■□□□□ 0.16
SP9P0CG40 AC244669.2-201ENST00000612320 853 ntBASIC16.06■□□□□ 0.16
SP9P0CG40 AC015967.2-201ENST00000624092 234 ntBASIC16.06■□□□□ 0.16
SP9P0CG40 AC006435.4-201ENST00000625037 234 ntBASIC16.06■□□□□ 0.16
SP9P0CG40 AL356737.1-201ENST00000634391 234 ntBASIC16.06■□□□□ 0.16
SP9P0CG40 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.06■□□□□ 0.16
SP9P0CG40 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SP9P0CG40 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SP9P0CG40 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SP9P0CG40 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SP9P0CG40 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.06■□□□□ 0.16
SP9P0CG40 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.06■□□□□ 0.16
SP9P0CG40 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SP9P0CG40 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SP9P0CG40 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SP9P0CG40 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SP9P0CG40 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.05■□□□□ 0.16
SP9P0CG40 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SP9P0CG40 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SP9P0CG40 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SP9P0CG40 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SP9P0CG40 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SP9P0CG40 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SP9P0CG40 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SP9P0CG40 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SP9P0CG40 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SP9P0CG40 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.05■□□□□ 0.16
SP9P0CG40 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SP9P0CG40 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
SP9P0CG40 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms