Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FREM3P0C091 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FREM3P0C091 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.02□□□□□ -0.01
FREM3P0C091 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.02□□□□□ -0.01
FREM3P0C091 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
FREM3P0C091 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.02□□□□□ -0.01
FREM3P0C091 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.02□□□□□ -0.01
FREM3P0C091 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FREM3P0C091 AC069262.1-201ENST00000539058 672 ntBASIC15.02□□□□□ -0.01
FREM3P0C091 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.02□□□□□ -0.01
FREM3P0C091 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.02□□□□□ -0.01
FREM3P0C091 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.02□□□□□ -0.01
FREM3P0C091 LINC00628-201ENST00000628516 1289 ntBASIC15.02□□□□□ -0.01
FREM3P0C091 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
FREM3P0C091 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
FREM3P0C091 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FREM3P0C091 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.02□□□□□ -0.01
FREM3P0C091 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
FREM3P0C091 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FREM3P0C091 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FREM3P0C091 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FREM3P0C091 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
FREM3P0C091 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FREM3P0C091 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
FREM3P0C091 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
FREM3P0C091 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FREM3P0C091 AC008677.1-201ENST00000519230 1561 ntBASIC15.01□□□□□ -0.01
FREM3P0C091 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FREM3P0C091 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
FREM3P0C091 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
FREM3P0C091 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
FREM3P0C091 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FREM3P0C091 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FREM3P0C091 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FREM3P0C091 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.01□□□□□ -0.01
FREM3P0C091 AC092580.3-201ENST00000430932 139 ntBASIC15.01□□□□□ -0.01
FREM3P0C091 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.01□□□□□ -0.01
FREM3P0C091 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FREM3P0C091 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.01□□□□□ -0.01
FREM3P0C091 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.01□□□□□ -0.01
FREM3P0C091 AC105233.2-201ENST00000523697 349 ntBASIC15.01□□□□□ -0.01
FREM3P0C091 AF228730.5-201ENST00000530288 346 ntBASIC15.01□□□□□ -0.01
FREM3P0C091 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.01□□□□□ -0.01
FREM3P0C091 AL138918.1-201ENST00000568306 659 ntBASIC15.01□□□□□ -0.01
FREM3P0C091 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.01□□□□□ -0.01
FREM3P0C091 AC026120.1-201ENST00000611536 926 ntBASIC15.01□□□□□ -0.01
FREM3P0C091 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
FREM3P0C091 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
FREM3P0C091 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.01□□□□□ -0.01
FREM3P0C091 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FREM3P0C091 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
FREM3P0C091 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.01□□□□□ -0.01
FREM3P0C091 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
FREM3P0C091 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.01□□□□□ -0.01
FREM3P0C091 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
FREM3P0C091 AC016027.1-202ENST00000607927 1699 ntBASIC15.01□□□□□ -0.01
FREM3P0C091 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
FREM3P0C091 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
FREM3P0C091 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.01□□□□□ -0.01
FREM3P0C091 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FREM3P0C091 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
FREM3P0C091 FAM220BP-201ENST00000377689 816 ntBASIC15.01□□□□□ -0.01
FREM3P0C091 AL671277.1-201ENST00000429656 993 ntBASIC15.01□□□□□ -0.01
FREM3P0C091 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.01□□□□□ -0.01
FREM3P0C091 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
FREM3P0C091 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.01□□□□□ -0.01
FREM3P0C091 FAM86C2P-203ENST00000528684 1004 ntBASIC15.01□□□□□ -0.01
FREM3P0C091 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
FREM3P0C091 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.01□□□□□ -0.01
FREM3P0C091 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.01□□□□□ -0.01
FREM3P0C091 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
FREM3P0C091 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.01□□□□□ -0.01
FREM3P0C091 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15□□□□□ -0.01
FREM3P0C091 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
FREM3P0C091 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15□□□□□ -0.01
FREM3P0C091 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15□□□□□ -0.01
FREM3P0C091 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
FREM3P0C091 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
FREM3P0C091 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
FREM3P0C091 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
FREM3P0C091 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15□□□□□ -0.01
FREM3P0C091 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15□□□□□ -0.01
FREM3P0C091 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
FREM3P0C091 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15□□□□□ -0.01
FREM3P0C091 PRYP6-201ENST00000514804 343 ntBASIC15□□□□□ -0.01
FREM3P0C091 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
FREM3P0C091 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15□□□□□ -0.01
FREM3P0C091 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
FREM3P0C091 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15□□□□□ -0.01
FREM3P0C091 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15□□□□□ -0.01
FREM3P0C091 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
FREM3P0C091 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15□□□□□ -0.01
FREM3P0C091 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
FREM3P0C091 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15□□□□□ -0.01
FREM3P0C091 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
FREM3P0C091 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
FREM3P0C091 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15□□□□□ -0.01
FREM3P0C091 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
FREM3P0C091 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
FREM3P0C091 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms