Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CHRNA1P02708 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.88■□□□□ 0.45
CHRNA1P02708 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.88■□□□□ 0.45
CHRNA1P02708 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.88■□□□□ 0.45
CHRNA1P02708 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRNA1P02708 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRNA1P02708 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRNA1P02708 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CHRNA1P02708 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.88■□□□□ 0.45
CHRNA1P02708 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.88■□□□□ 0.45
CHRNA1P02708 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRNA1P02708 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRNA1P02708 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.88■□□□□ 0.45
CHRNA1P02708 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CHRNA1P02708 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.87■□□□□ 0.45
CHRNA1P02708 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
CHRNA1P02708 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CHRNA1P02708 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.87■□□□□ 0.45
CHRNA1P02708 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA1P02708 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA1P02708 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA1P02708 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CHRNA1P02708 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA1P02708 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA1P02708 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CHRNA1P02708 DFFBP1-201ENST00000433250 979 ntBASIC17.87■□□□□ 0.45
CHRNA1P02708 AC114501.2-201ENST00000439631 535 ntBASIC17.87■□□□□ 0.45
CHRNA1P02708 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.87■□□□□ 0.45
CHRNA1P02708 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA1P02708 DOC2GP-202ENST00000514950 1163 ntBASIC17.87■□□□□ 0.45
CHRNA1P02708 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.87■□□□□ 0.45
CHRNA1P02708 AL008721.1-201ENST00000609964 604 ntBASIC17.87■□□□□ 0.45
CHRNA1P02708 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.87■□□□□ 0.45
CHRNA1P02708 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.87■□□□□ 0.45
CHRNA1P02708 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA1P02708 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA1P02708 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA1P02708 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA1P02708 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA1P02708 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA1P02708 AC006538.1-201ENST00000567905 1585 ntBASIC17.87■□□□□ 0.45
CHRNA1P02708 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA1P02708 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA1P02708 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CHRNA1P02708 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA1P02708 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA1P02708 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA1P02708 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.86■□□□□ 0.45
CHRNA1P02708 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA1P02708 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CHRNA1P02708 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA1P02708 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CHRNA1P02708 FZD10-202ENST00000539839 3282 ntBASIC17.86■□□□□ 0.45
CHRNA1P02708 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.86■□□□□ 0.45
CHRNA1P02708 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA1P02708 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.86■□□□□ 0.45
CHRNA1P02708 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.86■□□□□ 0.45
CHRNA1P02708 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA1P02708 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.86■□□□□ 0.45
CHRNA1P02708 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.86■□□□□ 0.45
CHRNA1P02708 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.86■□□□□ 0.45
CHRNA1P02708 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.86■□□□□ 0.45
CHRNA1P02708 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
CHRNA1P02708 AC026979.3-201ENST00000607315 403 ntBASIC17.86■□□□□ 0.45
CHRNA1P02708 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.86■□□□□ 0.45
CHRNA1P02708 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA1P02708 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA1P02708 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA1P02708 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.86■□□□□ 0.45
CHRNA1P02708 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.86■□□□□ 0.45
CHRNA1P02708 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA1P02708 AC138969.3-201ENST00000546612 1459 ntBASIC17.86■□□□□ 0.45
CHRNA1P02708 AC138932.2-201ENST00000548268 1459 ntBASIC17.86■□□□□ 0.45
CHRNA1P02708 AC126755.4-201ENST00000549796 1459 ntBASIC17.86■□□□□ 0.45
CHRNA1P02708 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA1P02708 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CHRNA1P02708 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA1P02708 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.86■□□□□ 0.45
CHRNA1P02708 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA1P02708 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA1P02708 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.86■□□□□ 0.45
CHRNA1P02708 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA1P02708 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA1P02708 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA1P02708 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA1P02708 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA1P02708 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA1P02708 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.85■□□□□ 0.45
CHRNA1P02708 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA1P02708 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA1P02708 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA1P02708 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA1P02708 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA1P02708 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA1P02708 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.85■□□□□ 0.45
CHRNA1P02708 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA1P02708 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CHRNA1P02708 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CHRNA1P02708 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CHRNA1P02708 KRT17P7-201ENST00000451704 1104 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms