Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.44■□□□□ 0.22
PDGFBP01127 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFBP01127 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFBP01127 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFBP01127 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.44■□□□□ 0.22
PDGFBP01127 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFBP01127 AC104581.1-202ENST00000635932 2618 ntBASIC16.44■□□□□ 0.22
PDGFBP01127 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFBP01127 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.44■□□□□ 0.22
PDGFBP01127 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFBP01127 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFBP01127 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.44■□□□□ 0.22
PDGFBP01127 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFBP01127 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFBP01127 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.44■□□□□ 0.22
PDGFBP01127 AC026954.1-201ENST00000429771 1293 ntBASIC16.44■□□□□ 0.22
PDGFBP01127 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.44■□□□□ 0.22
PDGFBP01127 AC093724.1-201ENST00000448659 1027 ntBASIC16.44■□□□□ 0.22
PDGFBP01127 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.44■□□□□ 0.22
PDGFBP01127 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.44■□□□□ 0.22
PDGFBP01127 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.44■□□□□ 0.22
PDGFBP01127 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.44■□□□□ 0.22
PDGFBP01127 AL359711.2-201ENST00000563105 872 ntBASIC16.44■□□□□ 0.22
PDGFBP01127 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFBP01127 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFBP01127 AL365330.1-201ENST00000607459 531 ntBASIC16.44■□□□□ 0.22
PDGFBP01127 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.44■□□□□ 0.22
PDGFBP01127 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFBP01127 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFBP01127 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PDGFBP01127 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFBP01127 AC093503.3-201ENST00000624917 2352 ntBASIC16.44■□□□□ 0.22
PDGFBP01127 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.44■□□□□ 0.22
PDGFBP01127 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.44■□□□□ 0.22
PDGFBP01127 AC087289.5-201ENST00000586076 3175 ntBASIC16.44■□□□□ 0.22
PDGFBP01127 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.44■□□□□ 0.22
PDGFBP01127 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFBP01127 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFBP01127 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PDGFBP01127 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFBP01127 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PDGFBP01127 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFBP01127 AC090164.3-201ENST00000610780 2143 ntBASIC16.43■□□□□ 0.22
PDGFBP01127 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.43■□□□□ 0.22
PDGFBP01127 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.43■□□□□ 0.22
PDGFBP01127 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFBP01127 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFBP01127 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PDGFBP01127 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFBP01127 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.43■□□□□ 0.22
PDGFBP01127 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFBP01127 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFBP01127 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PDGFBP01127 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.43■□□□□ 0.22
PDGFBP01127 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFBP01127 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFBP01127 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFBP01127 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.43■□□□□ 0.22
PDGFBP01127 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFBP01127 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFBP01127 FTH1P14-201ENST00000482930 551 ntBASIC16.43■□□□□ 0.22
PDGFBP01127 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFBP01127 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.43■□□□□ 0.22
PDGFBP01127 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.43■□□□□ 0.22
PDGFBP01127 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.43■□□□□ 0.22
PDGFBP01127 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFBP01127 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
PDGFBP01127 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFBP01127 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.43■□□□□ 0.22
PDGFBP01127 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFBP01127 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
PDGFBP01127 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PDGFBP01127 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFBP01127 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFBP01127 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFBP01127 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
PDGFBP01127 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.43■□□□□ 0.22
PDGFBP01127 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PDGFBP01127 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFBP01127 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PDGFBP01127 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.42■□□□□ 0.22
PDGFBP01127 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFBP01127 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.42■□□□□ 0.22
PDGFBP01127 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
PDGFBP01127 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFBP01127 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFBP01127 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFBP01127 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PDGFBP01127 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
PDGFBP01127 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFBP01127 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFBP01127 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFBP01127 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFBP01127 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFBP01127 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.42■□□□□ 0.22
PDGFBP01127 AL442647.2-201ENST00000429864 857 ntBASIC16.42■□□□□ 0.22
PDGFBP01127 CALR4P-201ENST00000431943 946 ntBASIC16.42■□□□□ 0.22
PDGFBP01127 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PDGFBP01127 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.42■□□□□ 0.22
PDGFBP01127 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms