Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.34■□□□□ 0.37
TRUB2O95900 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRUB2O95900 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.34■□□□□ 0.37
TRUB2O95900 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRUB2O95900 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRUB2O95900 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRUB2O95900 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRUB2O95900 AC018695.7-201ENST00000624587 2492 ntBASIC17.33■□□□□ 0.37
TRUB2O95900 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRUB2O95900 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRUB2O95900 ELL2P1-201ENST00000413990 1906 ntBASIC17.33■□□□□ 0.37
TRUB2O95900 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.33■□□□□ 0.37
TRUB2O95900 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.33■□□□□ 0.37
TRUB2O95900 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRUB2O95900 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRUB2O95900 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.33■□□□□ 0.37
TRUB2O95900 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRUB2O95900 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRUB2O95900 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRUB2O95900 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRUB2O95900 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRUB2O95900 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.33■□□□□ 0.36
TRUB2O95900 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRUB2O95900 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRUB2O95900 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.33■□□□□ 0.36
TRUB2O95900 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TRUB2O95900 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRUB2O95900 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRUB2O95900 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TRUB2O95900 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.33■□□□□ 0.36
TRUB2O95900 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.33■□□□□ 0.36
TRUB2O95900 YBX1P5-201ENST00000509441 847 ntBASIC17.33■□□□□ 0.36
TRUB2O95900 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.33■□□□□ 0.36
TRUB2O95900 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.33■□□□□ 0.36
TRUB2O95900 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.33■□□□□ 0.36
TRUB2O95900 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.33■□□□□ 0.36
TRUB2O95900 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TRUB2O95900 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.33■□□□□ 0.36
TRUB2O95900 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.33■□□□□ 0.36
TRUB2O95900 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRUB2O95900 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.33■□□□□ 0.36
TRUB2O95900 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRUB2O95900 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRUB2O95900 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TRUB2O95900 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TRUB2O95900 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRUB2O95900 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.33■□□□□ 0.36
TRUB2O95900 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRUB2O95900 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.33■□□□□ 0.36
TRUB2O95900 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRUB2O95900 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRUB2O95900 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRUB2O95900 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TRUB2O95900 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRUB2O95900 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRUB2O95900 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TRUB2O95900 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRUB2O95900 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TRUB2O95900 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRUB2O95900 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.32■□□□□ 0.36
TRUB2O95900 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRUB2O95900 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.32■□□□□ 0.36
TRUB2O95900 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRUB2O95900 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.32■□□□□ 0.36
TRUB2O95900 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRUB2O95900 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRUB2O95900 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.32■□□□□ 0.36
TRUB2O95900 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.32■□□□□ 0.36
TRUB2O95900 CEND1P1-201ENST00000451006 455 ntBASIC17.32■□□□□ 0.36
TRUB2O95900 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.32■□□□□ 0.36
TRUB2O95900 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TRUB2O95900 MIR4469-201ENST00000583919 79 ntBASIC17.32■□□□□ 0.36
TRUB2O95900 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRUB2O95900 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.32■□□□□ 0.36
TRUB2O95900 PCGF3-213ENST00000620529 1899 ntBASIC17.32■□□□□ 0.36
TRUB2O95900 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRUB2O95900 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRUB2O95900 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRUB2O95900 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.32■□□□□ 0.36
TRUB2O95900 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TRUB2O95900 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRUB2O95900 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRUB2O95900 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.32■□□□□ 0.36
TRUB2O95900 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRUB2O95900 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRUB2O95900 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
TRUB2O95900 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.32■□□□□ 0.36
TRUB2O95900 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.31■□□□□ 0.36
TRUB2O95900 AC026691.1-201ENST00000602502 2017 ntBASIC17.31■□□□□ 0.36
TRUB2O95900 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.31■□□□□ 0.36
TRUB2O95900 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.31■□□□□ 0.36
TRUB2O95900 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRUB2O95900 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRUB2O95900 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRUB2O95900 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.31■□□□□ 0.36
TRUB2O95900 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRUB2O95900 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRUB2O95900 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.31■□□□□ 0.36
TRUB2O95900 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TRUB2O95900 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms