Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.66■□□□□ 0.26
RFPL1O75677 REXO1L3P-201ENST00000622202 1288 ntBASIC16.66■□□□□ 0.26
RFPL1O75677 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RFPL1O75677 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.66■□□□□ 0.26
RFPL1O75677 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFPL1O75677 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFPL1O75677 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.66■□□□□ 0.26
RFPL1O75677 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.66■□□□□ 0.26
RFPL1O75677 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
RFPL1O75677 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.66■□□□□ 0.26
RFPL1O75677 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.66■□□□□ 0.26
RFPL1O75677 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFPL1O75677 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.65■□□□□ 0.26
RFPL1O75677 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFPL1O75677 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFPL1O75677 AC092384.3-202ENST00000564646 2873 ntBASIC16.65■□□□□ 0.26
RFPL1O75677 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFPL1O75677 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.65■□□□□ 0.26
RFPL1O75677 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFPL1O75677 AL356309.3-201ENST00000624132 1934 ntBASIC16.65■□□□□ 0.26
RFPL1O75677 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.65■□□□□ 0.26
RFPL1O75677 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.65■□□□□ 0.26
RFPL1O75677 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFPL1O75677 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.65■□□□□ 0.26
RFPL1O75677 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFPL1O75677 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.65■□□□□ 0.26
RFPL1O75677 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFPL1O75677 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.65■□□□□ 0.26
RFPL1O75677 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.65■□□□□ 0.26
RFPL1O75677 RPS2P1-201ENST00000434010 821 ntBASIC16.65■□□□□ 0.26
RFPL1O75677 AL591424.1-201ENST00000442569 1213 ntBASIC16.65■□□□□ 0.26
RFPL1O75677 IGHV3-22-201ENST00000520721 359 ntBASIC16.65■□□□□ 0.26
RFPL1O75677 OR7E14P-202ENST00000530490 1290 ntBASIC16.65■□□□□ 0.26
RFPL1O75677 SART3-203ENST00000546611 1184 ntBASIC16.65■□□□□ 0.26
RFPL1O75677 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.65■□□□□ 0.26
RFPL1O75677 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFPL1O75677 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.65■□□□□ 0.26
RFPL1O75677 FAM197Y3-203ENST00000618346 717 ntBASIC16.65■□□□□ 0.26
RFPL1O75677 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.65■□□□□ 0.26
RFPL1O75677 AL022326.1-202ENST00000641533 845 ntBASIC16.65■□□□□ 0.26
RFPL1O75677 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RFPL1O75677 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFPL1O75677 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFPL1O75677 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.65■□□□□ 0.26
RFPL1O75677 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RFPL1O75677 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
RFPL1O75677 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFPL1O75677 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFPL1O75677 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.65■□□□□ 0.26
RFPL1O75677 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFPL1O75677 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFPL1O75677 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFPL1O75677 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RFPL1O75677 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFPL1O75677 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
RFPL1O75677 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
RFPL1O75677 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RFPL1O75677 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFPL1O75677 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFPL1O75677 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
RFPL1O75677 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
RFPL1O75677 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.26
RFPL1O75677 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFPL1O75677 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFPL1O75677 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.64■□□□□ 0.25
RFPL1O75677 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
RFPL1O75677 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.64■□□□□ 0.25
RFPL1O75677 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFPL1O75677 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RFPL1O75677 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.64■□□□□ 0.25
RFPL1O75677 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFPL1O75677 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.64■□□□□ 0.25
RFPL1O75677 AC092910.1-201ENST00000482027 1129 ntBASIC16.64■□□□□ 0.25
RFPL1O75677 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.64■□□□□ 0.25
RFPL1O75677 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFPL1O75677 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.64■□□□□ 0.25
RFPL1O75677 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RFPL1O75677 NKAPP1-205ENST00000585790 367 ntBASIC16.64■□□□□ 0.25
RFPL1O75677 AC140113.2-201ENST00000604370 208 ntBASIC16.64■□□□□ 0.25
RFPL1O75677 AL139424.1-201ENST00000607572 797 ntBASIC16.64■□□□□ 0.25
RFPL1O75677 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.64■□□□□ 0.25
RFPL1O75677 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.64■□□□□ 0.25
RFPL1O75677 AL691403.2-201ENST00000618460 490 ntBASIC16.64■□□□□ 0.25
RFPL1O75677 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.64■□□□□ 0.25
RFPL1O75677 AL139288.1-201ENST00000623748 933 ntBASIC16.64■□□□□ 0.25
RFPL1O75677 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFPL1O75677 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
RFPL1O75677 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFPL1O75677 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RFPL1O75677 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RFPL1O75677 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFPL1O75677 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFPL1O75677 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RFPL1O75677 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RFPL1O75677 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFPL1O75677 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.64■□□□□ 0.25
RFPL1O75677 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFPL1O75677 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFPL1O75677 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFPL1O75677 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms