Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.68■□□□□ 0.26
SMAD6O43541 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.68■□□□□ 0.26
SMAD6O43541 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.68■□□□□ 0.26
SMAD6O43541 RARRES2P9-201ENST00000565168 469 ntBASIC16.68■□□□□ 0.26
SMAD6O43541 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.68■□□□□ 0.26
SMAD6O43541 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.68■□□□□ 0.26
SMAD6O43541 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.68■□□□□ 0.26
SMAD6O43541 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.68■□□□□ 0.26
SMAD6O43541 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
SMAD6O43541 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.68■□□□□ 0.26
SMAD6O43541 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.68■□□□□ 0.26
SMAD6O43541 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.68■□□□□ 0.26
SMAD6O43541 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMAD6O43541 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.68■□□□□ 0.26
SMAD6O43541 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMAD6O43541 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SMAD6O43541 ALOX12P2-203ENST00000570921 1945 ntBASIC16.68■□□□□ 0.26
SMAD6O43541 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.68■□□□□ 0.26
SMAD6O43541 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.68■□□□□ 0.26
SMAD6O43541 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMAD6O43541 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMAD6O43541 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMAD6O43541 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMAD6O43541 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMAD6O43541 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMAD6O43541 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.68■□□□□ 0.26
SMAD6O43541 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMAD6O43541 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SMAD6O43541 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMAD6O43541 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SMAD6O43541 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMAD6O43541 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMAD6O43541 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.67■□□□□ 0.26
SMAD6O43541 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.67■□□□□ 0.26
SMAD6O43541 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.67■□□□□ 0.26
SMAD6O43541 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMAD6O43541 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMAD6O43541 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.67■□□□□ 0.26
SMAD6O43541 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMAD6O43541 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.67■□□□□ 0.26
SMAD6O43541 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMAD6O43541 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMAD6O43541 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.67■□□□□ 0.26
SMAD6O43541 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.67■□□□□ 0.26
SMAD6O43541 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMAD6O43541 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMAD6O43541 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMAD6O43541 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMAD6O43541 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMAD6O43541 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SMAD6O43541 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMAD6O43541 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.66■□□□□ 0.26
SMAD6O43541 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.66■□□□□ 0.26
SMAD6O43541 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMAD6O43541 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMAD6O43541 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMAD6O43541 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMAD6O43541 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMAD6O43541 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMAD6O43541 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMAD6O43541 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMAD6O43541 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
SMAD6O43541 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.66■□□□□ 0.26
SMAD6O43541 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.66■□□□□ 0.26
SMAD6O43541 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.66■□□□□ 0.26
SMAD6O43541 HMGN1P19-201ENST00000436976 333 ntBASIC16.66■□□□□ 0.26
SMAD6O43541 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.66■□□□□ 0.26
SMAD6O43541 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.66■□□□□ 0.26
SMAD6O43541 AC098859.1-201ENST00000502915 1238 ntBASIC16.66■□□□□ 0.26
SMAD6O43541 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMAD6O43541 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.66■□□□□ 0.26
SMAD6O43541 DUX4L27-201ENST00000554796 1261 ntBASIC16.66■□□□□ 0.26
SMAD6O43541 AC015911.4-201ENST00000588022 1070 ntBASIC16.66■□□□□ 0.26
SMAD6O43541 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMAD6O43541 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SMAD6O43541 MIR6080-201ENST00000617359 66 ntBASIC16.66■□□□□ 0.26
SMAD6O43541 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.66■□□□□ 0.26
SMAD6O43541 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.66■□□□□ 0.26
SMAD6O43541 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.66■□□□□ 0.26
SMAD6O43541 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMAD6O43541 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMAD6O43541 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMAD6O43541 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.66■□□□□ 0.26
SMAD6O43541 TUBB3P1-201ENST00000405796 1332 ntBASIC16.66■□□□□ 0.26
SMAD6O43541 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
SMAD6O43541 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMAD6O43541 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMAD6O43541 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMAD6O43541 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD6O43541 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD6O43541 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SMAD6O43541 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.65■□□□□ 0.26
SMAD6O43541 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.65■□□□□ 0.26
SMAD6O43541 AC005622.1-201ENST00000636801 1703 ntBASIC16.65■□□□□ 0.26
SMAD6O43541 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD6O43541 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD6O43541 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.65■□□□□ 0.26
SMAD6O43541 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.65■□□□□ 0.26
SMAD6O43541 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD6O43541 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms