Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.65■□□□□ 0.42
CEP290O15078 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CEP290O15078 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
CEP290O15078 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CEP290O15078 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CEP290O15078 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CEP290O15078 AL355312.1-201ENST00000407115 2176 ntBASIC17.65■□□□□ 0.42
CEP290O15078 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.65■□□□□ 0.42
CEP290O15078 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.65■□□□□ 0.42
CEP290O15078 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CEP290O15078 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CEP290O15078 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CEP290O15078 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CEP290O15078 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CEP290O15078 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CEP290O15078 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.65■□□□□ 0.42
CEP290O15078 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.65■□□□□ 0.42
CEP290O15078 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CEP290O15078 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CEP290O15078 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CEP290O15078 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.65■□□□□ 0.42
CEP290O15078 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.65■□□□□ 0.42
CEP290O15078 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CEP290O15078 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CEP290O15078 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.65■□□□□ 0.42
CEP290O15078 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.64■□□□□ 0.42
CEP290O15078 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CEP290O15078 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CEP290O15078 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
CEP290O15078 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
CEP290O15078 AC120045.2-201ENST00000567334 178 ntBASIC17.64■□□□□ 0.42
CEP290O15078 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
CEP290O15078 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.64■□□□□ 0.41
CEP290O15078 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CEP290O15078 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.64■□□□□ 0.41
CEP290O15078 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CEP290O15078 AC018735.1-201ENST00000437208 1502 ntBASIC17.64■□□□□ 0.41
CEP290O15078 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.64■□□□□ 0.41
CEP290O15078 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CEP290O15078 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.64■□□□□ 0.41
CEP290O15078 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CEP290O15078 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CEP290O15078 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CEP290O15078 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.64■□□□□ 0.41
CEP290O15078 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.64■□□□□ 0.41
CEP290O15078 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CEP290O15078 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.64■□□□□ 0.41
CEP290O15078 BRI3BPP1-201ENST00000594224 787 ntBASIC17.64■□□□□ 0.41
CEP290O15078 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.64■□□□□ 0.41
CEP290O15078 AL096828.3-201ENST00000615354 462 ntBASIC17.64■□□□□ 0.41
CEP290O15078 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CEP290O15078 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CEP290O15078 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.64■□□□□ 0.41
CEP290O15078 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.64■□□□□ 0.41
CEP290O15078 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CEP290O15078 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.64■□□□□ 0.41
CEP290O15078 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.63■□□□□ 0.41
CEP290O15078 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CEP290O15078 SOCS2P1-201ENST00000417727 557 ntBASIC17.63■□□□□ 0.41
CEP290O15078 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.63■□□□□ 0.41
CEP290O15078 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CEP290O15078 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.63■□□□□ 0.41
CEP290O15078 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.63■□□□□ 0.41
CEP290O15078 LINC01115-203ENST00000606068 577 ntBASIC17.63■□□□□ 0.41
CEP290O15078 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CEP290O15078 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CEP290O15078 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CEP290O15078 KRT18P55-202ENST00000578578 1546 ntBASIC17.63■□□□□ 0.41
CEP290O15078 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CEP290O15078 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CEP290O15078 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.63■□□□□ 0.41
CEP290O15078 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CEP290O15078 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CEP290O15078 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CEP290O15078 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CEP290O15078 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.63■□□□□ 0.41
CEP290O15078 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CEP290O15078 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CEP290O15078 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC17.63■□□□□ 0.41
CEP290O15078 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.63■□□□□ 0.41
CEP290O15078 AC106760.1-201ENST00000508690 800 ntBASIC17.63■□□□□ 0.41
CEP290O15078 AC245884.6-201ENST00000515672 1067 ntBASIC17.63■□□□□ 0.41
CEP290O15078 CFL1-214ENST00000534769 758 ntTSL 2 BASIC17.63■□□□□ 0.41
CEP290O15078 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CEP290O15078 FGFR3P5-201ENST00000564496 886 ntBASIC17.63■□□□□ 0.41
CEP290O15078 AL158212.4-201ENST00000624062 1286 ntBASIC17.63■□□□□ 0.41
CEP290O15078 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.63■□□□□ 0.41
CEP290O15078 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CEP290O15078 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CEP290O15078 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CEP290O15078 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.63■□□□□ 0.41
CEP290O15078 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CEP290O15078 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CEP290O15078 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.62■□□□□ 0.41
CEP290O15078 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CEP290O15078 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.62■□□□□ 0.41
CEP290O15078 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.62■□□□□ 0.41
CEP290O15078 RPL13AP25-201ENST00000484130 612 ntBASIC17.62■□□□□ 0.41
CEP290O15078 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC17.62■□□□□ 0.41
CEP290O15078 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms