Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 LARP4B-201ENST00000316157 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 AC092364.2-201ENST00000596710 2692 ntBASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 SRCAP-202ENST00000395059 9126 ntTSL 2 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 BCOR-202ENST00000378444 6358 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 CHFR-201ENST00000266880 11133 ntTSL 2 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 AC016396.2-201ENST00000562575 1417 ntBASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 BMP1-204ENST00000397814 836 ntTSL 4 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 AC027682.1-201ENST00000562846 899 ntBASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 DGCR9-201ENST00000609630 2415 ntBASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 DZIP1-201ENST00000347108 7068 ntAPPRIS P4 TSL 5 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 TNS1-220ENST00000611415 6509 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 SHPRH-211ENST00000629427 7338 ntAPPRIS ALT1 TSL 5 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
CHKB-CPT1BH3BT56 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 EML1-203ENST00000334192 4064 ntTSL 5 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 CSPG4P12-201ENST00000558282 4853 ntBASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 SMIM10L1-201ENST00000622602 4795 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC9.16□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms