Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC27.07■■□□□ 1.92
BIVM-ERCC5R4GMW8 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
BIVM-ERCC5R4GMW8 BOLA2P3-201ENST00000404566 256 ntBASIC27.07■■□□□ 1.92
BIVM-ERCC5R4GMW8 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC27.07■■□□□ 1.92
BIVM-ERCC5R4GMW8 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC27.07■■□□□ 1.92
BIVM-ERCC5R4GMW8 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC27.07■■□□□ 1.92
BIVM-ERCC5R4GMW8 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC27.07■■□□□ 1.92
BIVM-ERCC5R4GMW8 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC27.07■■□□□ 1.92
BIVM-ERCC5R4GMW8 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC27.07■■□□□ 1.92
BIVM-ERCC5R4GMW8 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
BIVM-ERCC5R4GMW8 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC27.07■■□□□ 1.92
BIVM-ERCC5R4GMW8 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC27.07■■□□□ 1.92
BIVM-ERCC5R4GMW8 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC27.07■■□□□ 1.92
BIVM-ERCC5R4GMW8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC27.07■■□□□ 1.92
BIVM-ERCC5R4GMW8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC27.06■■□□□ 1.92
BIVM-ERCC5R4GMW8 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
BIVM-ERCC5R4GMW8 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
BIVM-ERCC5R4GMW8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC27.06■■□□□ 1.92
BIVM-ERCC5R4GMW8 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
BIVM-ERCC5R4GMW8 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
BIVM-ERCC5R4GMW8 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
BIVM-ERCC5R4GMW8 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
BIVM-ERCC5R4GMW8 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC27.06■■□□□ 1.92
BIVM-ERCC5R4GMW8 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC27.06■■□□□ 1.92
BIVM-ERCC5R4GMW8 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
BIVM-ERCC5R4GMW8 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
BIVM-ERCC5R4GMW8 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC27.06■■□□□ 1.92
BIVM-ERCC5R4GMW8 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
BIVM-ERCC5R4GMW8 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
BIVM-ERCC5R4GMW8 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
BIVM-ERCC5R4GMW8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC27.06■■□□□ 1.92
BIVM-ERCC5R4GMW8 AC005622.1-201ENST00000636801 1703 ntBASIC27.06■■□□□ 1.92
BIVM-ERCC5R4GMW8 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
BIVM-ERCC5R4GMW8 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
BIVM-ERCC5R4GMW8 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
BIVM-ERCC5R4GMW8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
BIVM-ERCC5R4GMW8 LINC01144-201ENST00000626198 1710 ntBASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 AC104989.1-201ENST00000519711 778 ntBASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 AL033527.5-201ENST00000641382 801 ntBASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 PDIA3P1-201ENST00000471856 1510 ntBASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 INTS4P2-202ENST00000614726 2019 ntBASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 RPS24-214ENST00000613865 538 ntTSL 5 BASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
BIVM-ERCC5R4GMW8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
BIVM-ERCC5R4GMW8 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
BIVM-ERCC5R4GMW8 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
BIVM-ERCC5R4GMW8 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
BIVM-ERCC5R4GMW8 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
BIVM-ERCC5R4GMW8 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC27.04■■□□□ 1.92
BIVM-ERCC5R4GMW8 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
BIVM-ERCC5R4GMW8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
BIVM-ERCC5R4GMW8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC27.04■■□□□ 1.92
BIVM-ERCC5R4GMW8 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
BIVM-ERCC5R4GMW8 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC27.04■■□□□ 1.92
BIVM-ERCC5R4GMW8 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
BIVM-ERCC5R4GMW8 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC27.04■■□□□ 1.92
BIVM-ERCC5R4GMW8 HNRNPUP1-201ENST00000554987 333 ntBASIC27.04■■□□□ 1.92
BIVM-ERCC5R4GMW8 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC27.04■■□□□ 1.92
BIVM-ERCC5R4GMW8 GNRHR2-203ENST00000581100 1187 ntBASIC27.04■■□□□ 1.92
BIVM-ERCC5R4GMW8 AC133552.6-201ENST00000613406 534 ntBASIC27.04■■□□□ 1.92
BIVM-ERCC5R4GMW8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
BIVM-ERCC5R4GMW8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC27.04■■□□□ 1.92
BIVM-ERCC5R4GMW8 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
BIVM-ERCC5R4GMW8 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
BIVM-ERCC5R4GMW8 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC27.04■■□□□ 1.92
BIVM-ERCC5R4GMW8 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
BIVM-ERCC5R4GMW8 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
BIVM-ERCC5R4GMW8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
BIVM-ERCC5R4GMW8 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
BIVM-ERCC5R4GMW8 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
BIVM-ERCC5R4GMW8 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
BIVM-ERCC5R4GMW8 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
BIVM-ERCC5R4GMW8 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
BIVM-ERCC5R4GMW8 FXR1-221ENST00000491674 365 ntTSL 2 BASIC27.03■■□□□ 1.92
BIVM-ERCC5R4GMW8 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC27.03■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms