Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLIC4Q9Y696 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
CLIC4Q9Y696 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIC4Q9Y696 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.93■□□□□ 0.62
CLIC4Q9Y696 PRSS29P-201ENST00000440800 595 ntBASIC18.93■□□□□ 0.62
CLIC4Q9Y696 AC009947.1-201ENST00000444350 727 ntBASIC18.93■□□□□ 0.62
CLIC4Q9Y696 FAAHP1-202ENST00000446499 1238 ntBASIC18.93■□□□□ 0.62
CLIC4Q9Y696 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CLIC4Q9Y696 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.93■□□□□ 0.62
CLIC4Q9Y696 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
CLIC4Q9Y696 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIC4Q9Y696 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIC4Q9Y696 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CLIC4Q9Y696 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CLIC4Q9Y696 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIC4Q9Y696 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.93■□□□□ 0.62
CLIC4Q9Y696 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIC4Q9Y696 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIC4Q9Y696 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIC4Q9Y696 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIC4Q9Y696 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLIC4Q9Y696 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.93■□□□□ 0.62
CLIC4Q9Y696 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.93■□□□□ 0.62
CLIC4Q9Y696 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIC4Q9Y696 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIC4Q9Y696 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CLIC4Q9Y696 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CLIC4Q9Y696 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLIC4Q9Y696 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CLIC4Q9Y696 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIC4Q9Y696 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CLIC4Q9Y696 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
CLIC4Q9Y696 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLIC4Q9Y696 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIC4Q9Y696 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIC4Q9Y696 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.92■□□□□ 0.62
CLIC4Q9Y696 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIC4Q9Y696 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLIC4Q9Y696 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.92■□□□□ 0.62
CLIC4Q9Y696 POU5F1P6-201ENST00000466990 990 ntBASIC18.92■□□□□ 0.62
CLIC4Q9Y696 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.92■□□□□ 0.62
CLIC4Q9Y696 KRT126P-201ENST00000549467 1181 ntBASIC18.92■□□□□ 0.62
CLIC4Q9Y696 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.92■□□□□ 0.62
CLIC4Q9Y696 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.92■□□□□ 0.62
CLIC4Q9Y696 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.92■□□□□ 0.62
CLIC4Q9Y696 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLIC4Q9Y696 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
CLIC4Q9Y696 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.92■□□□□ 0.62
CLIC4Q9Y696 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIC4Q9Y696 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CLIC4Q9Y696 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.92■□□□□ 0.62
CLIC4Q9Y696 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIC4Q9Y696 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLIC4Q9Y696 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.92■□□□□ 0.62
CLIC4Q9Y696 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.91■□□□□ 0.62
CLIC4Q9Y696 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.91■□□□□ 0.62
CLIC4Q9Y696 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIC4Q9Y696 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.9■□□□□ 0.62
CLIC4Q9Y696 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms