Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC11.34□□□□□ -0.59
LINC00588Q9Y4M8 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC11.34□□□□□ -0.59
LINC00588Q9Y4M8 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC11.34□□□□□ -0.59
LINC00588Q9Y4M8 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC11.34□□□□□ -0.59
LINC00588Q9Y4M8 KLF2P3-201ENST00000451977 1087 ntBASIC11.34□□□□□ -0.59
LINC00588Q9Y4M8 AC125807.1-201ENST00000483097 614 ntBASIC11.34□□□□□ -0.59
LINC00588Q9Y4M8 AC051619.7-201ENST00000568314 623 ntBASIC11.34□□□□□ -0.59
LINC00588Q9Y4M8 AC011467.4-201ENST00000594891 528 ntBASIC11.34□□□□□ -0.59
LINC00588Q9Y4M8 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
LINC00588Q9Y4M8 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC11.34□□□□□ -0.59
LINC00588Q9Y4M8 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC11.34□□□□□ -0.59
LINC00588Q9Y4M8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00588Q9Y4M8 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC11.34□□□□□ -0.59
LINC00588Q9Y4M8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00588Q9Y4M8 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00588Q9Y4M8 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC11.34□□□□□ -0.59
LINC00588Q9Y4M8 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC11.34□□□□□ -0.59
LINC00588Q9Y4M8 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00588Q9Y4M8 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC11.34□□□□□ -0.59
LINC00588Q9Y4M8 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00588Q9Y4M8 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
LINC00588Q9Y4M8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
LINC00588Q9Y4M8 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.59
LINC00588Q9Y4M8 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 AC107890.1-201ENST00000422478 521 ntBASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 RARRES2P9-201ENST00000565168 469 ntBASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 AP3S2-216ENST00000617003 1561 ntBASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00588Q9Y4M8 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 ACE-204ENST00000428043 5120 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 AMT-206ENST00000458307 1860 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms