Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PKP3Q9Y446 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
PKP3Q9Y446 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.67■□□□□ 0.26
PKP3Q9Y446 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PKP3Q9Y446 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PKP3Q9Y446 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PKP3Q9Y446 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PKP3Q9Y446 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PKP3Q9Y446 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.67■□□□□ 0.26
PKP3Q9Y446 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.67■□□□□ 0.26
PKP3Q9Y446 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.67■□□□□ 0.26
PKP3Q9Y446 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.67■□□□□ 0.26
PKP3Q9Y446 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.67■□□□□ 0.26
PKP3Q9Y446 AC074386.1-202ENST00000463561 864 ntBASIC16.67■□□□□ 0.26
PKP3Q9Y446 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.67■□□□□ 0.26
PKP3Q9Y446 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.67■□□□□ 0.26
PKP3Q9Y446 POLD2P1-201ENST00000511220 997 ntBASIC16.67■□□□□ 0.26
PKP3Q9Y446 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PKP3Q9Y446 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.67■□□□□ 0.26
PKP3Q9Y446 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.67■□□□□ 0.26
PKP3Q9Y446 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.67■□□□□ 0.26
PKP3Q9Y446 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.67■□□□□ 0.26
PKP3Q9Y446 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PKP3Q9Y446 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.67■□□□□ 0.26
PKP3Q9Y446 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PKP3Q9Y446 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PKP3Q9Y446 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PKP3Q9Y446 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PKP3Q9Y446 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PKP3Q9Y446 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PKP3Q9Y446 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.67■□□□□ 0.26
PKP3Q9Y446 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PKP3Q9Y446 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PKP3Q9Y446 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PKP3Q9Y446 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PKP3Q9Y446 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PKP3Q9Y446 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.66■□□□□ 0.26
PKP3Q9Y446 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.66■□□□□ 0.26
PKP3Q9Y446 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PKP3Q9Y446 AL031731.1-201ENST00000642131 2094 ntBASIC16.66■□□□□ 0.26
PKP3Q9Y446 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PKP3Q9Y446 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PKP3Q9Y446 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PKP3Q9Y446 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PKP3Q9Y446 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PKP3Q9Y446 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.66■□□□□ 0.26
PKP3Q9Y446 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PKP3Q9Y446 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PKP3Q9Y446 AC140658.5-201ENST00000438532 169 ntBASIC16.66■□□□□ 0.26
PKP3Q9Y446 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.66■□□□□ 0.26
PKP3Q9Y446 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PKP3Q9Y446 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.66■□□□□ 0.26
PKP3Q9Y446 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.66■□□□□ 0.26
PKP3Q9Y446 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.66■□□□□ 0.26
PKP3Q9Y446 AC068137.2-201ENST00000605408 478 ntBASIC16.66■□□□□ 0.26
PKP3Q9Y446 AL513190.1-201ENST00000621254 727 ntBASIC16.66■□□□□ 0.26
PKP3Q9Y446 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PKP3Q9Y446 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PKP3Q9Y446 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PKP3Q9Y446 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PKP3Q9Y446 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PKP3Q9Y446 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PKP3Q9Y446 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PKP3Q9Y446 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PKP3Q9Y446 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PKP3Q9Y446 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.66■□□□□ 0.26
PKP3Q9Y446 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PKP3Q9Y446 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PKP3Q9Y446 PMS2P7-201ENST00000506558 1336 ntBASIC16.66■□□□□ 0.26
PKP3Q9Y446 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
PKP3Q9Y446 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PKP3Q9Y446 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PKP3Q9Y446 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PKP3Q9Y446 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.66■□□□□ 0.26
PKP3Q9Y446 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PKP3Q9Y446 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PKP3Q9Y446 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PKP3Q9Y446 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PKP3Q9Y446 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
PKP3Q9Y446 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PKP3Q9Y446 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.65■□□□□ 0.26
PKP3Q9Y446 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PKP3Q9Y446 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PKP3Q9Y446 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PKP3Q9Y446 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PKP3Q9Y446 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.65■□□□□ 0.26
PKP3Q9Y446 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.65■□□□□ 0.26
PKP3Q9Y446 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.65■□□□□ 0.26
PKP3Q9Y446 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.65■□□□□ 0.26
PKP3Q9Y446 AC002347.1-201ENST00000569543 541 ntBASIC16.65■□□□□ 0.26
PKP3Q9Y446 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PKP3Q9Y446 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PKP3Q9Y446 AL009183.1-201ENST00000603760 355 ntBASIC16.65■□□□□ 0.26
PKP3Q9Y446 AC092865.6-201ENST00000642101 219 ntBASIC16.65■□□□□ 0.26
PKP3Q9Y446 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PKP3Q9Y446 FLJ16779-201ENST00000612722 7638 ntBASIC16.65■□□□□ 0.26
PKP3Q9Y446 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PKP3Q9Y446 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.65■□□□□ 0.26
PKP3Q9Y446 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PKP3Q9Y446 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms