Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 DOC2GP-204ENST00000639052 2548 ntBASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 RARRES2P8-201ENST00000566335 367 ntBASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 AC092902.6-201ENST00000641783 218 ntBASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 AKAP8P1-201ENST00000434743 1349 ntBASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 U82695.1-201ENST00000635752 1889 ntBASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 AC073439.1-201ENST00000624121 1774 ntBASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 AL355306.1-201ENST00000415580 579 ntBASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 ADH5P3-201ENST00000433842 1137 ntBASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 FAM58CP-201ENST00000435741 640 ntBASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 MTDHP5-201ENST00000598980 586 ntBASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 PCDH8P1-201ENST00000428983 2773 ntBASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGC3Q9UN70 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGC3Q9UN70 AC026691.1-201ENST00000602502 2017 ntBASIC17.43■□□□□ 0.38
PCDHGC3Q9UN70 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGC3Q9UN70 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PCDHGC3Q9UN70 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGC3Q9UN70 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
PCDHGC3Q9UN70 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PCDHGC3Q9UN70 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGC3Q9UN70 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGC3Q9UN70 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGC3Q9UN70 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGC3Q9UN70 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGC3Q9UN70 AL596087.1-201ENST00000400979 1969 ntBASIC17.43■□□□□ 0.38
PCDHGC3Q9UN70 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.43■□□□□ 0.38
PCDHGC3Q9UN70 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms