Protein–RNA interactions for Protein: Q9UHC6

CNTNAP2, Contactin-associated protein-like 2, humanhuman

Predictions only

Length 1,331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2Q9UHC6 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP2Q9UHC6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP2Q9UHC6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP2Q9UHC6 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP2Q9UHC6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP2Q9UHC6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP2Q9UHC6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP2Q9UHC6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP2Q9UHC6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CNTNAP2Q9UHC6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP2Q9UHC6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP2Q9UHC6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP2Q9UHC6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.06■□□□□ 0.48
CNTNAP2Q9UHC6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.06■□□□□ 0.48
CNTNAP2Q9UHC6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 RNA5SP421-201ENST00000516864 134 ntBASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 AC020765.3-201ENST00000613051 740 ntBASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP2Q9UHC6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 AC107890.1-201ENST00000422478 521 ntBASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 AC125807.1-201ENST00000483097 614 ntBASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 DUX4L27-201ENST00000554796 1261 ntBASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 PKD1P1-201ENST00000458669 6805 ntBASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 AC099398.1-201ENST00000567919 2776 ntBASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.04■□□□□ 0.48
CNTNAP2Q9UHC6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CNTNAP2Q9UHC6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNTNAP2Q9UHC6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.03■□□□□ 0.48
CNTNAP2Q9UHC6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNTNAP2Q9UHC6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNTNAP2Q9UHC6 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNTNAP2Q9UHC6 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CNTNAP2Q9UHC6 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CNTNAP2Q9UHC6 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.03■□□□□ 0.48
CNTNAP2Q9UHC6 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.03■□□□□ 0.48
CNTNAP2Q9UHC6 AC140878.1-201ENST00000565277 250 ntBASIC18.03■□□□□ 0.48
CNTNAP2Q9UHC6 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.03■□□□□ 0.48
CNTNAP2Q9UHC6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CNTNAP2Q9UHC6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.03■□□□□ 0.48
CNTNAP2Q9UHC6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNTNAP2Q9UHC6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CNTNAP2Q9UHC6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms