Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLIP2Q9UDT6 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CLIP2Q9UDT6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLIP2Q9UDT6 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLIP2Q9UDT6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CLIP2Q9UDT6 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 AC079140.1-201ENST00000508039 487 ntBASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 AC109635.5-201ENST00000533593 962 ntBASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 AL135744.1-201ENST00000565098 629 ntBASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 CYP2A7P1-201ENST00000595391 815 ntBASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 AL031055.1-201ENST00000606362 631 ntBASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIP2Q9UDT6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 AL162727.3-201ENST00000635661 2787 ntBASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 TSEN15P1-201ENST00000423257 515 ntBASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 AC093520.2-201ENST00000561830 333 ntBASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.65■□□□□ 0.74
CLIP2Q9UDT6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CLIP2Q9UDT6 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
CLIP2Q9UDT6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLIP2Q9UDT6 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLIP2Q9UDT6 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
CLIP2Q9UDT6 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLIP2Q9UDT6 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLIP2Q9UDT6 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLIP2Q9UDT6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CLIP2Q9UDT6 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.64■□□□□ 0.73
CLIP2Q9UDT6 AL592309.1-201ENST00000443127 649 ntBASIC19.64■□□□□ 0.73
CLIP2Q9UDT6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CLIP2Q9UDT6 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.64■□□□□ 0.73
CLIP2Q9UDT6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.64■□□□□ 0.73
CLIP2Q9UDT6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLIP2Q9UDT6 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CLIP2Q9UDT6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.64■□□□□ 0.73
CLIP2Q9UDT6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CLIP2Q9UDT6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.64■□□□□ 0.73
CLIP2Q9UDT6 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.64■□□□□ 0.73
CLIP2Q9UDT6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.64■□□□□ 0.73
CLIP2Q9UDT6 AKAP8P1-201ENST00000434743 1349 ntBASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms