Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.77■□□□□ 0.44
CNTN3Q9P232 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.77■□□□□ 0.44
CNTN3Q9P232 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.77■□□□□ 0.44
CNTN3Q9P232 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.77■□□□□ 0.44
CNTN3Q9P232 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.77■□□□□ 0.44
CNTN3Q9P232 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.77■□□□□ 0.44
CNTN3Q9P232 AC018529.1-201ENST00000613063 361 ntBASIC17.77■□□□□ 0.44
CNTN3Q9P232 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNTN3Q9P232 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNTN3Q9P232 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNTN3Q9P232 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNTN3Q9P232 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CNTN3Q9P232 PCGF3-213ENST00000620529 1899 ntBASIC17.77■□□□□ 0.43
CNTN3Q9P232 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNTN3Q9P232 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CNTN3Q9P232 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
CNTN3Q9P232 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNTN3Q9P232 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CNTN3Q9P232 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNTN3Q9P232 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.77■□□□□ 0.43
CNTN3Q9P232 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.77■□□□□ 0.43
CNTN3Q9P232 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CNTN3Q9P232 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTN3Q9P232 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTN3Q9P232 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.76■□□□□ 0.43
CNTN3Q9P232 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTN3Q9P232 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTN3Q9P232 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNTN3Q9P232 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNTN3Q9P232 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CNTN3Q9P232 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNTN3Q9P232 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.76■□□□□ 0.43
CNTN3Q9P232 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CNTN3Q9P232 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNTN3Q9P232 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTN3Q9P232 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTN3Q9P232 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNTN3Q9P232 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.76■□□□□ 0.43
CNTN3Q9P232 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTN3Q9P232 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNTN3Q9P232 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTN3Q9P232 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CNTN3Q9P232 MIR770-201ENST00000390219 98 ntBASIC17.76■□□□□ 0.43
CNTN3Q9P232 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CNTN3Q9P232 AC125807.1-201ENST00000483097 614 ntBASIC17.76■□□□□ 0.43
CNTN3Q9P232 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.76■□□□□ 0.43
CNTN3Q9P232 DUX4L27-201ENST00000554796 1261 ntBASIC17.76■□□□□ 0.43
CNTN3Q9P232 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.76■□□□□ 0.43
CNTN3Q9P232 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.76■□□□□ 0.43
CNTN3Q9P232 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CNTN3Q9P232 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.76■□□□□ 0.43
CNTN3Q9P232 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.76■□□□□ 0.43
CNTN3Q9P232 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTN3Q9P232 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.76■□□□□ 0.43
CNTN3Q9P232 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNTN3Q9P232 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTN3Q9P232 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CNTN3Q9P232 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.76■□□□□ 0.43
CNTN3Q9P232 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTN3Q9P232 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.75■□□□□ 0.43
CNTN3Q9P232 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNTN3Q9P232 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CNTN3Q9P232 AC106886.4-201ENST00000623557 2502 ntBASIC17.75■□□□□ 0.43
CNTN3Q9P232 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.75■□□□□ 0.43
CNTN3Q9P232 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNTN3Q9P232 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNTN3Q9P232 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNTN3Q9P232 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CNTN3Q9P232 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.75■□□□□ 0.43
CNTN3Q9P232 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.75■□□□□ 0.43
CNTN3Q9P232 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.75■□□□□ 0.43
CNTN3Q9P232 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.75■□□□□ 0.43
CNTN3Q9P232 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.75■□□□□ 0.43
CNTN3Q9P232 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.75■□□□□ 0.43
CNTN3Q9P232 MIR4453-201ENST00000584019 89 ntBASIC17.75■□□□□ 0.43
CNTN3Q9P232 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.75■□□□□ 0.43
CNTN3Q9P232 AL390955.2-201ENST00000603032 514 ntBASIC17.75■□□□□ 0.43
CNTN3Q9P232 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CNTN3Q9P232 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
CNTN3Q9P232 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNTN3Q9P232 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CNTN3Q9P232 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNTN3Q9P232 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNTN3Q9P232 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNTN3Q9P232 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNTN3Q9P232 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CNTN3Q9P232 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNTN3Q9P232 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNTN3Q9P232 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CNTN3Q9P232 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.75■□□□□ 0.43
CNTN3Q9P232 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CNTN3Q9P232 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNTN3Q9P232 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.75■□□□□ 0.43
CNTN3Q9P232 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.75■□□□□ 0.43
CNTN3Q9P232 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNTN3Q9P232 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNTN3Q9P232 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNTN3Q9P232 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.74■□□□□ 0.43
CNTN3Q9P232 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNTN3Q9P232 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms