Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 FOSL1P1-201ENST00000511041 816 ntBASIC15.71■□□□□ 0.11
VAPAQ9P0L0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.71■□□□□ 0.11
VAPAQ9P0L0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.71■□□□□ 0.11
VAPAQ9P0L0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.71■□□□□ 0.11
VAPAQ9P0L0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.71■□□□□ 0.11
VAPAQ9P0L0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.71■□□□□ 0.11
VAPAQ9P0L0 AC010654.1-201ENST00000615722 808 ntBASIC15.71■□□□□ 0.11
VAPAQ9P0L0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.71■□□□□ 0.11
VAPAQ9P0L0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VAPAQ9P0L0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
VAPAQ9P0L0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.71■□□□□ 0.11
VAPAQ9P0L0 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VAPAQ9P0L0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
VAPAQ9P0L0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.71■□□□□ 0.11
VAPAQ9P0L0 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.71■□□□□ 0.11
VAPAQ9P0L0 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VAPAQ9P0L0 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
VAPAQ9P0L0 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
VAPAQ9P0L0 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
VAPAQ9P0L0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.71■□□□□ 0.11
VAPAQ9P0L0 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VAPAQ9P0L0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.71■□□□□ 0.1
VAPAQ9P0L0 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
VAPAQ9P0L0 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.71■□□□□ 0.1
VAPAQ9P0L0 CDC14C-201ENST00000428251 1719 ntBASIC15.71■□□□□ 0.1
VAPAQ9P0L0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.71■□□□□ 0.1
VAPAQ9P0L0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
VAPAQ9P0L0 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
VAPAQ9P0L0 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
VAPAQ9P0L0 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
VAPAQ9P0L0 AC112504.1-201ENST00000623415 1841 ntBASIC15.71■□□□□ 0.1
VAPAQ9P0L0 AC144831.1-201ENST00000573312 2656 ntBASIC15.71■□□□□ 0.1
VAPAQ9P0L0 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 LINC02447-202ENST00000501888 2146 ntBASIC15.7■□□□□ 0.1
VAPAQ9P0L0 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 TSPY26P-202ENST00000565928 3884 ntBASIC15.7■□□□□ 0.1
VAPAQ9P0L0 AC126177.1-201ENST00000547829 2218 ntBASIC15.7■□□□□ 0.1
VAPAQ9P0L0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 SART3-203ENST00000546611 1184 ntBASIC15.7■□□□□ 0.1
VAPAQ9P0L0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPAQ9P0L0 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
VAPAQ9P0L0 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
VAPAQ9P0L0 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VAPAQ9P0L0 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VAPAQ9P0L0 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VAPAQ9P0L0 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VAPAQ9P0L0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VAPAQ9P0L0 DBET-201ENST00000630918 3363 ntBASIC15.69■□□□□ 0.1
VAPAQ9P0L0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
VAPAQ9P0L0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.69■□□□□ 0.1
VAPAQ9P0L0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.69■□□□□ 0.1
VAPAQ9P0L0 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VAPAQ9P0L0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VAPAQ9P0L0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VAPAQ9P0L0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.69■□□□□ 0.1
VAPAQ9P0L0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.69■□□□□ 0.1
VAPAQ9P0L0 FAM210CP-201ENST00000445714 574 ntBASIC15.69■□□□□ 0.1
VAPAQ9P0L0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.69■□□□□ 0.1
VAPAQ9P0L0 AC107918.2-201ENST00000530817 355 ntBASIC15.69■□□□□ 0.1
VAPAQ9P0L0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.69■□□□□ 0.1
VAPAQ9P0L0 MTDHP4-201ENST00000600287 670 ntBASIC15.69■□□□□ 0.1
VAPAQ9P0L0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.69■□□□□ 0.1
VAPAQ9P0L0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.69■□□□□ 0.1
VAPAQ9P0L0 AL355877.3-201ENST00000622820 899 ntBASIC15.69■□□□□ 0.1
VAPAQ9P0L0 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms